Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01655 ATGGTCTTCAAGGGAAGATTCTTCTCTTCCAAAAAATCCGATTCCTCTAGCCCCGATGCGTCATCCAACAGTCCTCGATCTTTCTCCTCCAATTCCCCTTCCAGATCCGACAAGAAGAAGGCTAAATCCGCCGCTCATCCAACTTTAGCAGCCGGAGGCGGCGGTGGAAGTGCCGGCGGTGGAGCTCTTGCTGCGTGTCGTCAGACGCAGGTGAAGGACGGGACCAAGAAGAAGGATGTGGTCAAGGGGAAGGAAAGTCAAACTCCGCCGCCGGAAGCTCGCAAGGATTCTCCGGTGAAGAAGTTGACGGCGGCGGAGGGACGGGAATCGTCGGTGTCGCCGATTCTGGCGTCGTCGCTGGGGCTGAACAGGATCAAGACGAGATCGGGACCGCTGCCGCAGGAGAGCTTCTTCGGGTTCAGGGGCGAGAAGGGAACGACGGCGTTAGGCGGCAGCAATCTCTCCCGTCCCGGCGTCGGCGTGCGCGGCGGCGATGGGAAGAAGAAGGAACCGGCCAGTCAGAACAGGGTCGGGTTTCGTGAGGGTTCCCATGGCGGTGCCACTGCTACCGGAGGGTGGGGCGATAATGGGAGCAATTCTGACAGCGTGTCGACCTTGGGGAGTATGCCGCCAAGGGAGCAGAGTCCGGTGGTGTTGCCTCGGTCGCGGTTGCAGAACGGAGAATCGTCCTCGGAAGCCGCAGGTAGCTCTGTAACTGCGTGTGTTTGTAGATTTTGTAATGATTCTGATTGTGTGGTTTTGGTTGATTTTTCAATCAGAATGAGGATTGGGGAGGGGTCTGGCGAGTGGAGTGGACTAGGGAGAATGTCTATTGGATCTGTATCTATATGTGTGGTTGGTTATCTTGCTTGCTCTTGTTCTGGCACAATGATTCTATTAGCAGGCAAGCAGGCATCATCATGGGCTCAGTCTGGAGGCTTAAGAAGTGCAGATGTTTGTACTCCAGAGACGGCATATGATTTTGAAAACCCAAAGGAGTCTGAATCTCCTCGCTTTCAAGCCATATTACGTGTTACTAGTGCACCTAGAAAGAGGTTTCCTTCGGATATCAAAAGTTTTTCCCATGAGTTGAATTCGAAAGGTGTCTGGCCTTTTCCATTTTTGAAGCCTCGGCGGTTGAATAACCTTGAGGAGATTTTGGTCGTTATTAGGGCAAAATTTGATAAAGCGAAGGAAGATGTAAACTCTGATTTAGCCATTTTTGCGGCAGATCTGGTAGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAATGGCAAGAGACAATTGAGGACTTGCTAGTTTTGGCAAGGAGCTGTGCTATGACTTCATCTGGCGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGAGCATCCTCCTGGGATGCTAAAGCAGCTTCACACCCGAATGCTTTTCATTCTCACAAGGTGTACCCGATTATTGCAATTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACCTGTTTTCAATCTTCGTCAATCAAGAGTCTTGCATTCTGCTGGAAAATGTATTCCTCCTAGTGTGGGAAGGGATTCTAAAAGTTCAAGTGCTGCAAAAGCCTTAAAGCCTTCATCTAAAAAAGCTTTTAGTCAAGAACAGAGTATGATGGGTTGGAAGAAAGATGTTATGCAACCGGAAAATCTTTCACTTCCTGCTGATGATGATAATACAAAACATTTTGACTCTTCAGGCAGGGATCGAATGGCTTCTTGGAAGAAATTCCCATCTCCGTCTGGAAAAAGCCCTAAAGAAGCTGCTCAGTTGAAGGAGCAAAATTATGGGAGGGTTGAATCTTCAAAGGCATCAATTAATAAGAGATTTCCTTCTGATGTGGACCTTTCTACTGCAAAGCCATCTGAGTTTCTTCCTATCAAAGATTCCTTGGATCATGCTTCCAAACACCAACATAAAGTTTCTTGGGGATACTGGGGAGATCAGCAGAATAATAGTGAGGAGAACTCAATAATTTGTCGTATATGTGAAGAGGAAGTTCCTACTTCACATGTTGAAGACCATTCGAGGATTTGTGCAGTTGCTGATAGATGCGATCAGAAGGGACTGAGTGTCAATGATCGTCTTGTAAGAATTGCTGAAACACTAGAAAAGATGATGGAATCTTGTTCACAAAAGGATACCCAACAAATGGTGGGAAGTCCTGATGTTGCAAAAGTATCAAATTCTAGTATGACTGAAGAATCTGATGTTCCTTCTCCTAAACTTAGTGATTGGTCTCGCAGAGGCTCAGATGACATGCTAGACTGTTTCCCCGAAACTGATAATTCTGCTTTTATGGATGACCTGAAAGGATTACCACTTATATCATGCAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCAAGGTCACCATTGATGACACCAAGGACAAGTCAGATTGACTTGCTCTTGGCGGGGAAGGGTGCTTATTCTGAACATGATGATCTGCTGCAGGCATGCCATATTTTAAAATCTTTTTCTATTTCTTTTATTTCTAATTTATTGCCTATACTAGTTGCTGGCATTGTCCATTCAAGTCAGAGCATCAACATGAATGACACATTTAGTAGGAAGAAGAAAGTGGAACTGCAACCACCGAGATTGTGTTTGGACGGAAGAGGCAAGCACAATGATGGGTGGCATAAGGCAGGCTTCATCACATGCATAGACAAGATGAATGAACTTGCTGATATAGCTCGATGTGTGGCAAATGCACCTCTGGACGATGATCGCACAACTTCATATTTATTATCTTGTCTTGATGACTTGCGGGTTGTTGTAGAACGAAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACACGTATTGAGAAGCTGATACGAGAGAAGTATCTGCAGCTCACTGAGATGGTGGATGTTGAAAAGATAGATACAGAGAGCACCGTTGATGATGATGTTCTTTTGGAAGATGACGTGGTTCGTAGTTTGAGAACAAGCCCAATCCATTCATCAAGGGATCGTACCTCTATTGATGACTTTGAAATTATAAAACCTATCAGTCGTGGGGCATTTGGGAGGGTTTTCTTGGCTAAAAAGAGAACAACCGGTGATCTTTTTGCAATAAAGGTATATATTCTTCGTGCTTCTGATTCATCTGTTGTATCATCACTTAATCTGAACATCCATGTTCTCAAGAAGGCAGATATGATCCGTAAAAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTACGCAATCCTTTTGTGGTTCGCTTCTTCTATTCTTTTACATGTCGTGAAAACTTATATCTTGTTATGGAGTATCTGAATGGAGGTGACCTGTATTCATTATTAAGAAATTTAGGTTGCCTAGATGAGGAAGTTGCTCGAGTATATATTGCTGAAGTGGTGCTTGCGTTAGAGTATTTGCATTCCCTGCATGTGGTTCATCGAGATCTGAAGCCTGACAATTTATTGATAGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCTAAAGTTGGTCTCATCAACAGCACAGATGATCTGTCTGGCCCAGCAGTGAATGGGACATCCCTACTTGAAGAGGATGAGGCTGCTGATGTATTTACATCTGAGGATCAATGGGAAAGGAGGAAAAAACGCTCTGCAGTGGGCACGCCTGATTACTTAGCCCCAGAGATACTTTTGGGAACTGGACATGCGTATACTGCCGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTACTTGTTGGTATTCCACCCTTCAATGCCGAGCATCCTCAGAATATATTTGATAATATTCTTAATCGTAAAATACCTTGGCCTTCAGTTCCTGCAGAGATGAGTCCTGAAGCACAGGATCTTATTGATCGATTATTGACAGAAGATCCTAATCAGAGACTGGGATCTAAAGGCGCATCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTGCTTCTGAGAGCGCTCTGGATACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGCCTTGTATATCCAGCCAGTGATGTTGAGGATTCTAGTGATGCCGATAGCTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTGGCACATCTGTCAATTACTCTTTCAGTAATTTCTCCTTCAAGAACCTCTCCCAGCTTGCATCTATCAACTACGATCTCACTAAAGGATGGAAAGATGATCCTCCGACGAATTCTAGTGCATAG 4374 0.4481 MVFKGRFFSSKKSDSSSPDASSNSPRSFSSNSPSRSDKKKAKSAAHPTLAAGGGGGSAGGGALAACRQTQVKDGTKKKDVVKGKESQTPPPEARKDSPVKKLTAAEGRESSVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGTTALGGSNLSRPGVGVRGGDGKKKEPASQNRVGFREGSHGGATATGGWGDNGSNSDSVSTLGSMPPREQSPVVLPRSRLQNGESSSEAAGSSVTACVCRFCNDSDCVVLVDFSIRMRIGEGSGEWSGLGRMSIGSVSICVVGYLACSCSGTMILLAGKQASSWAQSGGLRSADVCTPETAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFLKPRRLNNLEEILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSSGEFWLQCESIVQELDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAGKCIPPSVGRDSKSSSAAKALKPSSKKAFSQEQSMMGWKKDVMQPENLSLPADDDNTKHFDSSGRDRMASWKKFPSPSGKSPKEAAQLKEQNYGRVESSKASINKRFPSDVDLSTAKPSEFLPIKDSLDHASKHQHKVSWGYWGDQQNNSEENSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNDRLVRIAETLEKMMESCSQKDTQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSDDMLDCFPETDNSAFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLLQACHILKSFSISFISNLLPILVAGIVHSSQSINMNDTFSRKKKVELQPPRLCLDGRGKHNDGWHKAGFITCIDKMNELADIARCVANAPLDDDRTTSYLLSCLDDLRVVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDTESTVDDDVLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVYILRASDSSVVSSLNLNIHVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLHVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLEEDEAADVFTSEDQWERRKKRSAVGTPDYLAPEILLGTGHAYTADWWSVGVILFELLVGIPPFNAEHPQNIFDNILNRKIPWPSVPAEMSPEAQDLIDRLLTEDPNQRLGSKGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDVEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSGTSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPPTNSSA 1457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01655 1457 MobiDBLite consensus disorder prediction 71 103 - -
Vimu8g01655 1457 MobiDBLite consensus disorder prediction 517 616 - -
Vimu8g01655 1457 MobiDBLite consensus disorder prediction 1 231 - -
Vimu8g01655 1457 MobiDBLite consensus disorder prediction 9 32 - -
Vimu8g01655 1457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1164 1176 IPR008271 GO:0004672|GO:0006468
Vimu8g01655 1457 ProSiteProfiles AGC-kinase C-terminal domain profile. 1336 1440 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vimu8g01655 1457 Gene3D Phosphorylase Kinase; domain 1 1023 1364 - -
Vimu8g01655 1457 MobiDBLite consensus disorder prediction 524 547 - -
Vimu8g01655 1457 Gene3D Transferase(Phosphotransferase) domain 1 1129 1353 - -
Vimu8g01655 1457 ProSiteProfiles Protein kinase domain profile. 1025 1335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g01655 1457 Coils Coil 380 400 - -
Vimu8g01655 1457 MobiDBLite consensus disorder prediction 721 752 - -
Vimu8g01655 1457 MobiDBLite consensus disorder prediction 567 583 - -
Vimu8g01655 1457 MobiDBLite consensus disorder prediction 796 816 - -
Vimu8g01655 1457 CDD STKc_MAST_like 1031 1340 - -
Vimu8g01655 1457 MobiDBLite consensus disorder prediction 192 211 - -
Vimu8g01655 1457 SMART serkin_6 1025 1335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g01655 1457 SUPERFAMILY Protein kinase-like (PK-like) 1011 1373 IPR011009 -
Vimu8g01655 1457 MobiDBLite consensus disorder prediction 1385 1402 - -
Vimu8g01655 1457 MobiDBLite consensus disorder prediction 721 759 - -
Vimu8g01655 1457 PANTHER SERINE/THREONINE-PROTEIN KINASE 696 1429 - -
Vimu8g01655 1457 MobiDBLite consensus disorder prediction 1380 1403 - -
Vimu8g01655 1457 Pfam Protein kinase domain 1025 1335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01655 Vimu-Chr8 22381740 22395764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01655 1 240 AGC Kinase Gene Family AT3G17850 36.957 1.75e-18 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Vimu8g01655 Pkinase 4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01655 - - oeu:111405228 1589.32