Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01632 ATGCTTCCTCCCTCACGACGAGAGTTCAGGGATGTCTATGTTGTGTTTGAGTTGATGGAGTCTGACCTTCATCAAGTGATTAAGGCAAACGATGATCTTAGCCCTGAGCACTATCAATTTTTCTTGTACCAACTTCTTAGAGGCCTCAAATTTATACACACAGCAAATGTGTTTCATCGTGATTTGAAGCCAAAAAATATTCTAGCTAATGCTGATTGCAAACTAAAAATATGTGATTTCGGACTTGCTCGAGTTTCATTTAATGAGGCTCCATCAGCTATATTCTGGACAGACTATGTTGCAACCCGGTGGTATCGTGCACCTGAACTATGCGGCTCTTTTTTCTCAAAATATACTCCCGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCACTGGGAAGCCATTGTTTCCAGGAAAAAATGTAGTGCACCAATTGGATCTCATAACTGACCTGCTTGGCACTCCTCCTACTGAAACCATTTCTAAGATTCGAAATGAGAAGGCTAGAAGGTACCTTGGTAGCATGAGGAAAAAACAAGCTATTCCATTCACCAAAAAATTTCCAAATGTAGATCCTTTGGGCCTTCGTTTGCTGGAGCGATTACTTGCATTTGATCCTAAAGATCGTCCAGCAGCTGAAGAGGCACTAAGTGACCCTTATTTCAATGGTTTGGCAAATGTGGACCGTGAACCATCCACTCAACCCATTTCAAAGCTGGAGTTTGAGTTTGAGAGGAGAAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCCCAGATGCTCCAAGAATATCTTCGTGGCGGAGAACAAACAAGCTTCATGTATCCAAGTGGGGTTGATCGATTCAAGCGACAGTTTGCTCATCTTGAGGAGCATTCTGGCAAAGGTGAACGAGGCACTCCATTGTTGAGGCACCATGCCTCCTTGCCTAGAGAGCGAGTTCCAGCTCCCAAGGATGAAAATAATCAAAATGATGATGGTGAAAATCCAACTGCAGCAGTTAATGAGACAGATTCTGGAAACCCAGATGCACAAAACGGACACTCCAAGCCAAACTGCAGTGCACGTAGCCTGTTGAAGAGTGCCAGCATTAGTGGTTCAAAGTGTATAGATGTGAAAAAAAGTAATGATCAAGAGGAGGAGCCACTTACAGAGGTCAGTGATGAGACTCTGGATGAGTTGACAAAGGTTGCTTCCCTGCATACTTGA 1248 0.4271 MLPPSRREFRDVYVVFELMESDLHQVIKANDDLSPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLITDLLGTPPTETISKIRNEKARRYLGSMRKKQAIPFTKKFPNVDPLGLRLLERLLAFDPKDRPAAEEALSDPYFNGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGEQTSFMYPSGVDRFKRQFAHLEEHSGKGERGTPLLRHHASLPRERVPAPKDENNQNDDGENPTAAVNETDSGNPDAQNGHSKPNCSARSLLKSASISGSKCIDVKKSNDQEEEPLTEVSDETLDELTKVASLHT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01632 415 MobiDBLite consensus disorder prediction 339 369 - -
Vimu8g01632 415 Gene3D Phosphorylase Kinase; domain 1 1 272 - -
Vimu8g01632 415 Pfam Protein kinase domain 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g01632 415 FunFam Mitogen-activated protein kinase 21 249 - -
Vimu8g01632 415 FunFam Mitogen-activated protein kinase 250 272 - -
Vimu8g01632 415 MobiDBLite consensus disorder prediction 320 338 - -
Vimu8g01632 415 MobiDBLite consensus disorder prediction 320 369 - -
Vimu8g01632 415 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g01632 415 SMART serkin_6 5 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g01632 415 Gene3D Transferase(Phosphotransferase) domain 1 21 249 - -
Vimu8g01632 415 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 278 - -
Vimu8g01632 415 SUPERFAMILY Protein kinase-like (PK-like) 9 231 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01632 Vimu-Chr8 22180926 22185975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01632 1 415 MAP Kinase Gene Family AT3G18040 80.471 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Vimu8g01632 Pkinase 5.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01632 - - gmx:100787677 745.347