Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01594 ATGCACGCGAAAACGGACTCTGAGGTAACAAGCCTCGCCGCGTCCTCCCCCACGCGCTCCCCTCCTCGCCGCCCTCTCTACTACGTCCAGAGTCCGTCCAGAGATTCCCACGACGGCGAGAAGACCGCCACAACTTCGTTTCATTCCACCCCTGTTCTGAGCCCCGTTGCCTCTCCTCCCCACTCGCGCCAATCCTCCTCCACGCGCTTCTCCAAGAAGGATCACAGCCACAGTCTCAAGCCCTGGAAGCAAATCGATGTCATTGAAGAGGAAGGCCTTCTTCAAGGTGATGATCGCCGCAATGGGCTCTCTCGTCGCTGCTACTTTCTCGCCTTTGTTGTTGGGTTCTTGCTTCTCTTCTCCCTCTTCTCACTCATCCTCTGGGGGGCTAGTAGACCCATGAAGCCCAAGATCTCCGTCAAGGATGAATGTTTTGGGACGAAATCTGAAGTGGGCATTGGTCAAGTTTTCAATCTTAGAATGAAATATGAACTGTGTGTCGATCAATTTCGCGTGTTTAAAGCGAAATCGAAAGTGGGCCAAGTTCTAGTTCGATATGTCATTTTTGGAGTGAAAAGTGAAAGCATAAAGTTTGATGATCTCAGGGTACAAGCTGGTTCAGATGCAACTGGTGTGACCACCGATATGATCACAATGAATTCCACTTTGAAATTCACATACCGAAACACAGGCACGTTTTTCGGGGTCCATGTCACAGCCACACCCGTGGAACTCTCCTATTCAGACATCGTAATTGCTTCAGGCGATATGAAGAAGTTCTATCAATCTAGGAGGAGCCAAAGGTTGGTGAGTGTAGCAGTGATGGGTAACAAAATCCCTCTGTATGGAAGTGGTGCTAGCCTAAGTAGCACAACGGGTATGCCCACAGTGCCTGTGCCATTGAACCTAAAATTCGTGCTACGATCAAGGGCTTATGTGCTTGGGAAATTGGTGAAGCCTAAGTACTACAAAACCATTAAATGTTCCATCACTTTGGATCCCAAGAAGCTCACTTCTCCGGTTTCTCTCAAAAAATCTTGCACATATGATTGA 1053 0.4872 MHAKTDSEVTSLAASSPTRSPPRRPLYYVQSPSRDSHDGEKTATTSFHSTPVLSPVASPPHSRQSSSTRFSKKDHSHSLKPWKQIDVIEEEGLLQGDDRRNGLSRRCYFLAFVVGFLLLFSLFSLILWGASRPMKPKISVKDECFGTKSEVGIGQVFNLRMKYELCVDQFRVFKAKSKVGQVLVRYVIFGVKSESIKFDDLRVQAGSDATGVTTDMITMNSTLKFTYRNTGTFFGVHVTATPVELSYSDIVIASGDMKKFYQSRRSQRLVSVAVMGNKIPLYGSGASLSSTTGMPTVPVPLNLKFVLRSRAYVLGKLVKPKYYKTIKCSITLDPKKLTSPVSLKKSCTYD 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01594 350 MobiDBLite consensus disorder prediction 1 77 - -
Vimu8g01594 350 MobiDBLite consensus disorder prediction 43 66 - -
Vimu8g01594 350 Pfam Late embryogenesis abundant protein 225 319 IPR004864 -
Vimu8g01594 350 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 100 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01594 Vimu-Chr8 21927890 21929582 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01594 - - gmx:100817451 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04831 11 68238445 68239773 Vimu8g01594 8 21927890 21929582 PCT