Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01531 GTCAAGATGTACACATCAAGGAAGAAAATCCACAAAGATAAGGATGCTGAGCCAACTGAATTTGAGGAATCAGTTGGACAGGCATTCTTTGATCTTGAAAATACTAACAATGAACTGAAAAGTGACCTGAAAGATTTATACATTAATTCAGCTGTCCAAATAGATGTTTCTGGGAACCGCAAGGCTGTGGTTATACATGTCCCCTACAGATTAAGGAAGGGATTCAGGAAGATCCATGTCAGGCTTGTAAGAGAACTTGAGAAAAAATTTAGCGGGAAGGATGTAGTCCTGATTGCCACCAGGAGGATAGTGAGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGTCCTCGCAGCCGCACACTCACTGCTGTGCATGAGGCAATGCTGGAGGATATTGTATTACCTGCTGAGATTGTTGGAAAGCGTGTTAGGTTTAGAATTGATGGTTCCAAGATTATGAAGGTGTTTTTGGACCCCAAGGAGAGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAGCTTTCAGGCAAAGATGTTGTATTTGAATATCCTACATCCGAGGCTTAG 582 0.4261 VKMYTSRKKIHKDKDAEPTEFEESVGQAFFDLENTNNELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHEAMLEDIVLPAEIVGKRVRFRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPTSEA 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01531 193 ProSitePatterns Ribosomal protein S7e signature. 81 94 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vimu8g01531 193 PANTHER 40S RIBOSOMAL PROTEIN S7 3 192 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vimu8g01531 193 Pfam Ribosomal protein S7e 9 188 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01531 Vimu-Chr8 21199914 21201161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01531 3 193 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 76.440 9.83e-113 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01531 K02993 - gmx:100527642 367.466