Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01519 ATGAATCCACCATCAGATAAACACAATATAGAACCCAGAAACCTGGGCAATTCAGGTTCAAATATTAATAGTGGAGTTAACTCACCCCAGAGGAAGATTTTGTCAGGAACAAAGCTGCAACGTGGTTTACACAGTCCACTTATGACAGAGCCATCACCAACGTTAATAAACCAAGTAGGTTCTAACAAGTTTCCTGAGGTGTTTCGAGTAAAACAAGGAAGCTATGCTGATCATCCCTCAGCCAAAATTTCAGAACTGATGAAATCAACTAGCTTGGATCGTGTGGCTTGCTTATTGAGAAAGGTTGTGCAAGAGATTGAGCGACGTATATCGACTCAAGCAGAACATTTAAAAACTCAAAACAATATTTTTAAGGCCCGTGAAGAAAAATATCACTCAAGAATCAGAGTCCTTGAAGCTCTTGCATCTGGAACTGACGAAGAAAGAGAGACTGAGAGGATTGAAAAAGAAGAAAAGAAGGTAGAGGAATTAAAACAAACTAGGATGACTAAAATGCAAGAAGAAAAGGAAAATGATGTGAACCTAATTGAGAACACTAAAAGGGAAGAAAAGAGGGAATGCGACAAAGAGGTTATTAGATATATTAAAGAGTTGAAGGATAAGACTAAGGAGATTTCAACATTGAAACAAAAGCTAGAAACGATGAAAAAAACATATGAAGTACAATGTTCACAGATGGAACAAAAAACTAAGGAGGAAAATAGAGCAGATGGCAAAGAGATTAATAGATATATTAACGAGTTAGAGGACAAAACTATGGAAATTTCAACATTAAATCAGAAACTAGAAACACTGAAAAAAACGTGTGAAGAGCAACGCTTACAATTAGAAGCAAAAGCAGAGGAGGGAAAGATGACAGATGAGAAAGATGTAATGAAAATGTTAGAGGACAAAAACATGGAAATTTCAACGTTGAGGAAAAATCTAGAAACACTAGAAACGATGTCAAAAACATATGAAGTACAGTGTTCACAGTTGAAAGCACAAGTTGAGGAGAAGAACATGAGAGATGGAACAGATTCTATCAGATATATTAAAGAATTAGAGGACAAAAACGTGGAAATTTCAACGTTGAAGCAAAAACTAGACAAACTAGAAACGATGGCAAAAACATATGAAGTACAGTGTTCAGAGTTGAAAGCAAAAGTTGAGGAGAAGAACATGACAGATGGAAAAGATTCTATCAGATATATTAAAGAGTTGGATGACAAAAATATGGAAATTTCAATACTAATCAAAAAACTAGAGACAATGAAAAAAGAATATGAAGTACAATGCTCACGGTTGGAGGCAAAAGTTGAGGAGGAAAAGAGCGAAGAGGGTAAAGAGATTAGTAGATATATTAAAGAGCTAGAGGACAAAGATGTGGAAATTTCAACACTGAGGCAAAGACTAGAAACAGTGACAAAAACATACGAAGTACAATGCTCAGAACTGAAAGCAAAAGCTGAGGACGAAAAGATGGCAAATGGAAAAGAGGCTATTAGTTATATTAAAGAGTTGGAGGACAAAAATAAGGAAATTTCTGCATATAGGCAAGAATTGGAAACGATGAAAAAACAATATGAAGTTCAATGCTCCCAGTTGAAAGCAAAAACTGAAGAGGAAAAAATAGCAAATGGGAATGAGACTATTAGATATATCAAAGAGCTAGAGGAAAAAAATATGGAGATTTCAGCATTTAAACAGGAGCTAGAAACAATGAAAAAAACACATGAAGTTCAGTGCTCAGAACTGAAAGCAAACGCTGAAGAGGAAAAAATGGCGAATGGGAGAGAAATTATTAAATATACCAAAGAGCTAGAGGACAAAAATATGGAGATTTTAGCATTTAAGCAAGAACTAGAAACATATGAAGCACAATGCTCAGAATTGAAAGCAAAAGCTCAAGATGAAAAAATGGCGAATGAGAAAGAAATTATGAAATATATGAAAGAAGTAGAGGACAAAAATATGGAAGTTTCATCATTTAAGCAAGAACTAGAAACAACGAAAAAAACACATGAAGTACGATGCTCAGAATGGGAAGCAAAAGTGGAGGCTGGTAAAGAAGAGCTGAAAGAGAAATCACAAGAATACGAAAATTTGTTGGAAAAACTAAGAAATAAGGTTAAAGAGAATGAAACCCTTTACGAGGCAAAATATCAGAAGTGGATGCAGAAAGAGAACCAGATACGAAAAGATGTGAATTTTCAGTTCAGTTCCATAAAGACATTGAAATTATCATGGGAATCTATTAAGCAAGATGCTTTGAAAGAGCAAATTATTTACTCTGAGGAATGTAAAAAATTAGGTTTAAATCTGAAACCACTAGTAGATGCAGCTGAGAATTATCAAATAGTTCTTGCAGAAAACCGAAAACTGTTCAATGAAGTTCAAGAATTAAAAGGAAATATAAGAGTATATTGTCGACTTAGACCATTTCTTCCTGGTCAAAAGGAAAAACAATCTATTGTGGAACACGTTGGTGAAACTGATTTGGTTGTGGCAAATCCTTCCAAACCAGGAAAGGAAGGCCTTAGAACATTTAAGTTCAATAAGGTCTTTGGTCCAACCTCAACTCAAGCTGGGGTGTATGCTGACATACAAGCCTTCATACGATCAGTATTGGATGGGTATAACGTATGTATATTTGCTTATGGTCAAACTGGTTCAGGGAAAACTTACACAATGAGTGGTCCAAATAATGCAACATCAGAGAGTGTTGGTGTTAACTATCGAGCTCTTAATGATCTCTTCACCATATCTACAAGTAGAAAAAGCTCCATAGAGTATGAGATTGTGCCTGATGCTACCATGCAACCTGTGAAATCACCTGAAGATGTCATAAAGCTAATGGACATTGGTCTGAAAAATAGAGCTAAGGGTTCGACAGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTCTCAATTCATGTTCGTGGGATGGATAAAAAGGCTGGTTCGTCTCTTCATGGTAATCTTCATTTGGTAGATTTAGCAGGAAGTGAAAGAGTTGATCGCTCTGAAGTAACTGGGGATAGACTCAAGGAAGCACAACATATTAACAAATCACTATCTGCTCTTGGAGATGTCATTTTTGCACTTTCTCAGAAGAGTTCTCATGTGCCATATAGAAATAGCAAGCTCACTCAACTTCTGCAAACATCTCTTGGTGGTCAAGCAAAAACACTCATGTTGGTCCAAATTAATTCTGATGTAAAGTCCTTTTCTGAATCTTTGAGTACTTTAAAGTTTGCTGAGAGAGTTTCTGGAGTTGAGTTAGGAGCTGCTAAAAGTAGTAAAGAAGGAAGAGATGTGGCTTCTTTGAAGGACACTATTTCGGTTAAAGATGAAGAGATTGAGAAGTTACAATTACTTAAGGATCTAAAAAATGTATATCCTGGTGCTAATTCTGAGAACATTGAAACTTCCTAA 3444 0.3574 MNPPSDKHNIEPRNLGNSGSNINSGVNSPQRKILSGTKLQRGLHSPLMTEPSPTLINQVGSNKFPEVFRVKQGSYADHPSAKISELMKSTSLDRVACLLRKVVQEIERRISTQAEHLKTQNNIFKAREEKYHSRIRVLEALASGTDEERETERIEKEEKKVEELKQTRMTKMQEEKENDVNLIENTKREEKRECDKEVIRYIKELKDKTKEISTLKQKLETMKKTYEVQCSQMEQKTKEENRADGKEINRYINELEDKTMEISTLNQKLETLKKTCEEQRLQLEAKAEEGKMTDEKDVMKMLEDKNMEISTLRKNLETLETMSKTYEVQCSQLKAQVEEKNMRDGTDSIRYIKELEDKNVEISTLKQKLDKLETMAKTYEVQCSELKAKVEEKNMTDGKDSIRYIKELDDKNMEISILIKKLETMKKEYEVQCSRLEAKVEEEKSEEGKEISRYIKELEDKDVEISTLRQRLETVTKTYEVQCSELKAKAEDEKMANGKEAISYIKELEDKNKEISAYRQELETMKKQYEVQCSQLKAKTEEEKIANGNETIRYIKELEEKNMEISAFKQELETMKKTHEVQCSELKANAEEEKMANGREIIKYTKELEDKNMEILAFKQELETYEAQCSELKAKAQDEKMANEKEIMKYMKEVEDKNMEVSSFKQELETTKKTHEVRCSEWEAKVEAGKEELKEKSQEYENLLEKLRNKVKENETLYEAKYQKWMQKENQIRKDVNFQFSSIKTLKLSWESIKQDALKEQIIYSEECKKLGLNLKPLVDAAENYQIVLAENRKLFNEVQELKGNIRVYCRLRPFLPGQKEKQSIVEHVGETDLVVANPSKPGKEGLRTFKFNKVFGPTSTQAGVYADIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNNATSESVGVNYRALNDLFTISTSRKSSIEYEIVPDATMQPVKSPEDVIKLMDIGLKNRAKGSTAMNERSSRSHSVVSIHVRGMDKKAGSSLHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSHVPYRNSKLTQLLQTSLGGQAKTLMLVQINSDVKSFSESLSTLKFAERVSGVELGAAKSSKEGRDVASLKDTISVKDEEIEKLQLLKDLKNVYPGANSENIETS 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01519 1147 Coils Coil 451 471 - -
Vimu8g01519 1147 Coils Coil 405 446 - -
Vimu8g01519 1147 ProSiteProfiles Kinesin motor domain profile. 805 1095 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g01519 1147 Coils Coil 147 193 - -
Vimu8g01519 1147 Coils Coil 555 589 - -
Vimu8g01519 1147 Coils Coil 248 289 - -
Vimu8g01519 1147 Gene3D Kinesin motor domain 747 934 IPR036961 -
Vimu8g01519 1147 Coils Coil 302 336 - -
Vimu8g01519 1147 PANTHER KINESIN-LIKE PROTEIN KLP-3 671 1123 IPR027640 GO:0003777|GO:0007018
Vimu8g01519 1147 SMART kinesin_4 803 1103 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g01519 1147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 781 1094 IPR027417 -
Vimu8g01519 1147 MobiDBLite consensus disorder prediction 11 35 - -
Vimu8g01519 1147 MobiDBLite consensus disorder prediction 1 51 - -
Vimu8g01519 1147 Gene3D - 597 634 - -
Vimu8g01519 1147 Gene3D - 294 335 - -
Vimu8g01519 1147 Gene3D - 244 281 - -
Vimu8g01519 1147 Gene3D - 445 487 - -
Vimu8g01519 1147 Gene3D - 547 587 - -
Vimu8g01519 1147 Gene3D - 346 388 - -
Vimu8g01519 1147 Gene3D - 642 683 - -
Vimu8g01519 1147 Gene3D - 497 538 - -
Vimu8g01519 1147 Gene3D - 193 234 - -
Vimu8g01519 1147 Gene3D - 396 437 - -
Vimu8g01519 1147 Pfam Kinesin motor domain 811 929 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g01519 1147 Pfam Kinesin motor domain 934 1093 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g01519 1147 Coils Coil 352 396 - -
Vimu8g01519 1147 Coils Coil 665 724 - -
Vimu8g01519 1147 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 747 957 - -
Vimu8g01519 1147 Coils Coil 198 236 - -
Vimu8g01519 1147 Coils Coil 608 653 - -
Vimu8g01519 1147 PRINTS Kinesin heavy chain signature 879 900 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g01519 1147 PRINTS Kinesin heavy chain signature 996 1014 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g01519 1147 PRINTS Kinesin heavy chain signature 1045 1066 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g01519 1147 PRINTS Kinesin heavy chain signature 965 982 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g01519 1147 Coils Coil 501 539 - -
Vimu8g01519 1147 Gene3D Kinesin motor domain 935 1136 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01519 Vimu-Chr8 21099818 21107103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01519 793 1095 Calmodulin-binding Proteins AT5G65930 38.348 4.67e-58 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01519 K10406 - gmx:100779403 1013.83