Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01517 ATGCGCTTCAGCTGCAATGGTTGCCGCGTCCTCCGCCGCGGCTGCACGGCGGACTGCCCCATTCGAAGGTCCCTCGAATGGATAAGTTCCCCTCACTCTCAGTCCAACGCCACCCTCTTTCTCGCTAAGTTCTATGGCCGTCAAGGCCTCCTCAACCTCCTCATCAATGCTCCCTCCCATCTCCAATCAGCGGTATTCAAATCTTTGCTATACGAAGCTTGCGGTAGGATGGTGAACCCGATTTTCGGCTCGACCGGGTTACTCTCGACCGGAAATTGGCACCTCTGTGAAGCTGCTGCCAAAGCCGTTCTCAGTGGCGCCCCGATTCAAGAGGCTCTTCTTGATGGAGTGGAGAGTCTCGATTTCAAGGCTTGCGATATTCGCCACGTGGCAAGGAGTCATAAATCGTACGGCCCTGGTGCACTCAAAGTAGTAAAGTCAGGGACCAGCAAGTTCAAGCGCCGCGCTGCGAAGCCAAAAGTGGAGTCAACCGTGGCTGAGTTGGGTGAAAGCGAGTTATTTGGACAGGGTCCTCTGAGTCAGGACTCGGCGTCTGGGTTGACTCGGACGAGTGAGAACAAAATCATTGGTGGGGAAGCCGACAGTAGCTGCAGCGAGAATGTCGTGGTGCCGGCTCGAGCCAATGATGAAGAAAGTGAGCTTCGGTTGACTTTGGGGTGGGGACCATTGAAAAATCAATAA 702 0.5456 MRFSCNGCRVLRRGCTADCPIRRSLEWISSPHSQSNATLFLAKFYGRQGLLNLLINAPSHLQSAVFKSLLYEACGRMVNPIFGSTGLLSTGNWHLCEAAAKAVLSGAPIQEALLDGVESLDFKACDIRHVARSHKSYGPGALKVVKSGTSKFKRRAAKPKVESTVAELGESELFGQGPLSQDSASGLTRTSENKIIGGEADSSCSENVVVPARANDEESELRLTLGWGPLKNQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01517 233 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Vimu8g01517 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 4 224 - -
Vimu8g01517 233 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01517 Vimu-Chr8 21093615 21094508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01517 1 230 AS2 family AT3G02550 43.673 1.14e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vimu8g01517 LOB 4e-21 No_clan