Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01509 ATGCCGGACGTTCAGACCCTTGTCAATGATTTTGTGAACAAGCTTAAGAAACGTAAAATTGAAGGTTCACAGGCCACAGCAAAGCTCACAGCAGAGTTGCTCCGGTCTGTGATATCACAGCAGCGGGTGCCACACACAAACCAGGCCACAGCTCTGATTCATGCAGTAAGGGCTATTGGGGAGCAGCTTATTGCTGCCAATCCTAAGATCACGGAAGCAAAACCACCTGAAGGATTTGGACTGACGGTGCATGACTCATTAGGTGTCAGTAGAGAAGTTTGTTACAGCTGTCAATTACCTTTTATCCCATTTTGCATGTTGCAGATACCTTTTCCTGTTGCTACCATGCTAGCCGTGGGAAATATTGTGAGGCGTGTTCTGCACATTATAAGGGAAGAGGATCTCTCCCTCGCAACAGCTGCTATGGCTGGTTTGGGGGTATCAGTTGCAAGTGACGATGAAGACGATGAGGAGCGAGATGAAAATCCTGTTTTATCTGCTGCTGCTGTAGCAGCTGCTGCTAGAAGTACATTACGTCCACCGTCATTACAAACTCTTCTAGAGGATACGTCTGATTCAGCTGCCGCTCCCCACACATCTTCCTCTGGGGGTGAATCTGACGGGAGAACTATTGAGAAAGGTTCAAGAGTTAGGAAGTTGAAACATGATGTCATTGAAGCAGTTAATGAACTAATTCAAGACATATCTACTTGCTATGAACAAATAGCTGAGCAGGCAGTGGAGCACATTCACCACAATGAGGTAATTTTAACGTTAGGCAGCTCAAAAACAGTTTTGGAATTTCTTTATGCTGCGAAGGAAAAGCAAAGATCATTTAAGGTCTTTGTTGCTGAAGGTGCCCCAAGATACCAAGGACATATCCTTGCAAAAGAATTGGCTGCCAGAGGCTTACAGACCACAGTAATTTCTGATTCTGCCGTTTTTGCATTGATTTCCCGAGTGAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGAGGAGTTATTGCCCCAGTTGGGTTAAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCATTTGTTGTACTTGCTGGGAGTCACAAGCTCACCTGCCACTCAGCAATTCTGCTAAGATCCCAATCATTGGGTGTGTGCTGGTGGACCCCACAAAATAGACAACTTATTATTCATCAGAAGGGTATTGATGAAGAAATGAATAAAAAATCTTTGGATGACTTGGGATTTGGTAATTTGTGTCCTTTGTATCCACACAATCCTGAAGTCCTTCTTAATGAACTGAGATCCCCGTCTGAGCTACTTGACTTTGGGGAATTCTCAGATTGCATGGATTCTGCAAGCGGTGCTGGTTCTCTTCATGTTGTCAATCCAACCTTTGATTATGTGCCGCCAAAATTTGTTAGTCTATTTATTACTGACACGGGAGGGCACAACCCGTCATATATGTACCGGCTCATAGCTGATTACTATTCAGCTGATGATTTGGTGGTGAAACGAAGACCTGTTACAGGGAGTTGA 1527 0.444 MPDVQTLVNDFVNKLKKRKIEGSQATAKLTAELLRSVISQQRVPHTNQATALIHAVRAIGEQLIAANPKITEAKPPEGFGLTVHDSLGVSREVCYSCQLPFIPFCMLQIPFPVATMLAVGNIVRRVLHIIREEDLSLATAAMAGLGVSVASDDEDDEERDENPVLSAAAVAAAARSTLRPPSLQTLLEDTSDSAAAPHTSSSGGESDGRTIEKGSRVRKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHHNEVILTLGSSKTVLEFLYAAKEKQRSFKVFVAEGAPRYQGHILAKELAARGLQTTVISDSAVFALISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLTCHSAILLRSQSLGVCWWTPQNRQLIIHQKGIDEEMNKKSLDDLGFGNLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGAGSLHVVNPTFDYVPPKFVSLFITDTGGHNPSYMYRLIADYYSADDLVVKRRPVTGS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01509 508 Gene3D - 238 502 IPR042529 -
Vimu8g01509 508 SUPERFAMILY NagB/RpiA/CoA transferase-like 115 493 IPR037171 -
Vimu8g01509 508 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 69 - -
Vimu8g01509 508 MobiDBLite consensus disorder prediction 189 208 - -
Vimu8g01509 508 Pfam Initiation factor 2 subunit family 211 482 IPR000649 GO:0044237
Vimu8g01509 508 MobiDBLite consensus disorder prediction 189 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01509 Vimu-Chr8 21054225 21059498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01509 1 500 Eukaryotic Initiation Factors Gene Family AT3G07300 64.087 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01509 K03754 - gmx:100778545 702.59