Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01491 ATGTTGCTTGAAGCACTAGCTATCCTCGTCATCGTACTCTCATTCATGGTTTTTGTGTTCCAAAAAAAACACCATGGGAGAACTGCACCAGGTCCCAAACCCTTGCCAATTATTGGTAACCTTCATATGCTAGGAAAACTCCCACATCGAACCCTTCAATCTCTTGCCACAAAATATGGTCCCATAATGTCCTTAAAGCTAGGGCAGCACCCAGCCATAGTTGTTTCTTCTCCACAAACTGCAGAACTGTTCCTCAAACCCCATGACATTGTTTTTGCCAGCAGACCCAAAACCCAAGCCACAGATCTTCTTTTTTATGACAGCAAGGGTATGACTTTTTCTGAGTACGGTGCATACTGGCGCAACGCCAGGAAAGTGTGCACTGTGCAGCTTCTGAGTGCCTCAAAGGTTGAGATGTTTGCTCCTCTGAGGAGACAAGAGTTGAGAGTGTTGGTGAAGTCTCTGAAAAATTCTGCAGCATCAGGTGAGGTTGTCGATCTGAGTGAGTTGCTGGGAGAGCTTATGGAGAACATCGTGTTCAAAATGGTGTTGGGGCGTGCCAAAAATGATAGATTTGACTTAAAATTGCTGGTTCACGAAGTGTTGAACTTGATTGGACTATTCAATCTTGCAGATTACATGCCCTGGTTAGGAGTGTTTGATCCTCAGGGAATAACAAAAAGATTAAAGAAAGCAACAAAGTCATTTGATGAGCTATTGGAACAAATAATCCAAGAACACGAAAGTAATCCATATGACCAAGATCAAAATCGCAACATGGACTTTGTGGATATTTTGTTGTCTCTCATGCACCAACCCGACGATGTTCAAAATCACCAAGACGCCATTGATAGAACAAACATAAAAGGTATCATAATAGACATGATAATTGCAGGATTAGAAACCTCTTCCACAACAGTAGAATGGGCCATGTCACGACTCTTGAGACACCCGACTGTTATGAAGAGACTTCAACAGGAGCTAGAACATGTGGTCGGAATAAACAGACATGTGGAGGAAAATGACTTGGAACAGTTGTCTTATTTGAACATGGTGGTGAAGGAAACACTAAGGTTACACCCGGCTGCACCTTTGCTATTACCTCGTGAGTGTAGAGAAGATGTAACTATTGATGGTTATTTGATAAAGAAAAAAACAAGGGTTATGGTAAATACTTGGGCTATAGGTCGAGATCCTAAAGTTTGGGACAAGGCCGAGATTTTCGACCCTACAAGGTTTGAGAATAACAACGTAGATGTTCGTGGAAAGGACTTTCGGTTTTTACCATTTGGGTCGGGTCGAAGAGGGTGTCCTGGGATTCATTTGGGTTTAACCACTATTAGTCTTGTTTTGGCTGAATTGGTGCATTGTTTTGATTGGGAGCTTCCATTGGGCATGTGTTGTGATGAGTTAGACATGGAAGAGATATTTGGACTCTCCATACCAAGAAAGAAACATTTGCTCACTATACCAGTTTATCGACTCGCCATTTAG 1494 0.4224 MLLEALAILVIVLSFMVFVFQKKHHGRTAPGPKPLPIIGNLHMLGKLPHRTLQSLATKYGPIMSLKLGQHPAIVVSSPQTAELFLKPHDIVFASRPKTQATDLLFYDSKGMTFSEYGAYWRNARKVCTVQLLSASKVEMFAPLRRQELRVLVKSLKNSAASGEVVDLSELLGELMENIVFKMVLGRAKNDRFDLKLLVHEVLNLIGLFNLADYMPWLGVFDPQGITKRLKKATKSFDELLEQIIQEHESNPYDQDQNRNMDFVDILLSLMHQPDDVQNHQDAIDRTNIKGIIIDMIIAGLETSSTTVEWAMSRLLRHPTVMKRLQQELEHVVGINRHVEENDLEQLSYLNMVVKETLRLHPAAPLLLPRECREDVTIDGYLIKKKTRVMVNTWAIGRDPKVWDKAEIFDPTRFENNNVDVRGKDFRFLPFGSGRRGCPGIHLGLTTISLVLAELVHCFDWELPLGMCCDELDMEEIFGLSIPRKKHLLTIPVYRLAI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01491 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Vimu8g01491 497 FunFam Cytochrome P450 83B1 16 490 - -
Vimu8g01491 497 Pfam Cytochrome P450 30 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 SUPERFAMILY Cytochrome P450 24 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 Coils Coil 321 341 - -
Vimu8g01491 497 Gene3D Cytochrome P450 17 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01491 497 PANTHER CYTOCHROME P450 93A3-LIKE 5 495 - -
Vimu8g01491 497 CDD CYP71-like 58 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01491 Vimu-Chr8 20949228 20953350 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01491 9 495 Monolignol Biosynthesis Gene Families AT4G36220 41.153 1.50e-129 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01491 - - var:108345921 860.907