Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01483 ATGCACCAACTGGATGATGTTCAAAATCACCAAGATGCCATTGATAGAACAAACGTGAAAGCTATCCTTTTAGACATGATAACTGCAGCATTTGACACCTCTTCCATAACAGTAGAATGGGCCATGTCACAACTCTTGAGGCACCCAACTGTTATGAAGAGACTTCAACAGGAGCTAGAACATGTGGTAGGAATGAACAGACACGTGGAGGAAAATGACTTAGAAAAGTTGTCTTATTTGAACATGGTGGTGAAGGAAACACTAAGGTTACACCCGGTCGGACCTTTGTTGGTACCTCGCGAGTGTCAAGAAGATATCACCATTGATGGCTATTTAATAAAGAAAAAAACAAGGGTTATAGTAAATGCTTGGGCTATTGGGCGAGATCCTAAAGTTTGGGACAAGGCCGAGATTTTCGACCCTACAAGGTTTGAGAATAACAACGTAGATGTTCGTGGAAAGGACTTTCGGATTTTACCATTTGGGTCGGGTAGAAGAGTGTGCCCCGGGATTCATATGGGTTTAACGACTCTTAGTCTTGTTTTGGCTGAATTAGTGCATTGTTTTGATTGGAAGCTTCCGTTGGGCATGTGTTGTGATGAGTTAGACATGGAAGAGATATTTGGGCTCACTATACCAAGAAAAAAACATCTATTAACTAGATCAGTTTATCGACTATTTGCTTAG 687 0.4119 MHQLDDVQNHQDAIDRTNVKAILLDMITAAFDTSSITVEWAMSQLLRHPTVMKRLQQELEHVVGMNRHVEENDLEKLSYLNMVVKETLRLHPVGPLLVPRECQEDITIDGYLIKKKTRVIVNAWAIGRDPKVWDKAEIFDPTRFENNNVDVRGKDFRILPFGSGRRVCPGIHMGLTTLSLVLAELVHCFDWKLPLGMCCDELDMEEIFGLTIPRKKHLLTRSVYRLFA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01483 228 PRINTS E-class P450 group I signature 168 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 PRINTS E-class P450 group I signature 18 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 PRINTS E-class P450 group I signature 81 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 PRINTS E-class P450 group I signature 38 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 PRINTS E-class P450 group I signature 122 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 PRINTS E-class P450 group I signature 158 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 Gene3D Cytochrome P450 1 225 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 FunFam Predicted protein 27 220 - -
Vimu8g01483 228 SUPERFAMILY Cytochrome P450 10 221 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 161 170 IPR017972 GO:0005506|GO:0016705
Vimu8g01483 228 PRINTS P450 superfamily signature 82 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 PRINTS P450 superfamily signature 159 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 PRINTS P450 superfamily signature 168 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 PRINTS P450 superfamily signature 29 46 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 PANTHER CYTOCHROME P450 93A3-LIKE 10 226 - -
Vimu8g01483 228 Pfam Cytochrome P450 9 217 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01483 228 Coils Coil 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01483 Vimu-Chr8 20907017 20907703 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01483 8 218 Cytochrome P450 AT2G45550 48.341 3.00e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01483 - - var:108345921 435.261