Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01478 ATGTTGGTTGAAGCAGTAGCTATCCTCATCATACTCTCATTCATTGTTTTCGTGTTTCAAAACAAAGATGATGGGAGAACTGCACCAGGTCCCAAACCCTTGCCAATTATCGGTAACCTTCATATGCTAGGAAAACTCCCACATCGAACACTTCAATCTCTTGCCACAAAATATGGTCCCATAATGTCCTTAAAGCTAGGGCAGCTCCCAACCATAGTGGTTTCTTCTCCACAAACTGCAGAACTGTTCCTCAAAACCCATGATGTTGTTTTTGCCAGCAGACCCAAAATCCAAGCCACTGACTTTCTTTGTCATGGCAGCAAGGGTTTGGCCTTTTCTGAGTACAGTGCATACTGGCGCAACGCGAGGAAAGTGTGCACTGTGCAGCTTCTGAGTGCCTCAAAGGTTGAGATGTTTGCTCCTCTGAGGAGAGAAGAATTAGGAGTATTGGTGAAGTCGCTGAAAAATTCTGCAGCATCTGGTGAGGTTGTCGATCTGAGTGAGTTGCTGGGGGAGCTTTTGGAGAACATCGTGTTCAAAATGGTGTTGGGGAGTGCCAAAGATGATAGATTTGACTTAAAATGGCTGATTCTTGAAGTGATGAACTCGGTTGGAGCTTTCAATCTTGCAGATTACATGCCCTGGATTGGGGTATTTGATCTTCAGGGACTAACGAGAAGATTAAAGAAAACAACCAAGTTATATGACGAGCTGTTGGAGAAAATAATCCAAGAACACGAGAGTAATCCATATGACAAAGATAAAGAACGGAAGATGGACTTTGTGGATATTTTACTGTCACTCATGCACCAATCTGATGATGTTCAGAATCATCAAGACCCCATTGATAGAACAAACGTAAAAAGTATCATATTAGACATGTTAACGGCAGCATTTGACACCTCTTCGACAACAGTAGAATGGGCCATGTCACAACTCTTGAGGCACCCAACTGTCATGAAGAGACTTCAACAGGAGCTAGAACATGTGGTCGGAATGAACAGACACGTGGAGGAAAATGACTTAGAAAAGTTGTCTTATTTGAACATGGTGGTGAAGGAAACACTAAGGTTACACCCGGTTGCACCTTTGCTATTACCTCGTGAGTGTAGAGAAGATGTAACTATTGATGGCTATTTGATAAAGAAAAAAACAAGGGTTATGATAAATGCTTGGGCTATAGGGCGAGATCCTAAAGTTTGGGACAAGGCTGAGATTTTCGACCCTACAAGGTTTGAGAATAACAACGTAGATATTCGTGGAAAGGACTTTCGGATTTTACCATTTGGGTCGGGTCGAAGAGGGTGTCCTGGGATTCATTTGGGTTTAACCACTGTTAGTCTTGTTTTGGCTGAATTGGTGCATTGTTTTGATTGGAAGCTTCCATTGGGAATGTGTTGTGATGAGTTAGACATGGAAGAGATATTTGGACTCACCACACCAAGAAAGAAGCATTTGCTCACTAAACCAGTTTATCGACTCGCCATTTAG 1491 0.4252 MLVEAVAILIILSFIVFVFQNKDDGRTAPGPKPLPIIGNLHMLGKLPHRTLQSLATKYGPIMSLKLGQLPTIVVSSPQTAELFLKTHDVVFASRPKIQATDFLCHGSKGLAFSEYSAYWRNARKVCTVQLLSASKVEMFAPLRREELGVLVKSLKNSAASGEVVDLSELLGELLENIVFKMVLGSAKDDRFDLKWLILEVMNSVGAFNLADYMPWIGVFDLQGLTRRLKKTTKLYDELLEKIIQEHESNPYDKDKERKMDFVDILLSLMHQSDDVQNHQDPIDRTNVKSIILDMLTAAFDTSSTTVEWAMSQLLRHPTVMKRLQQELEHVVGMNRHVEENDLEKLSYLNMVVKETLRLHPVAPLLLPRECREDVTIDGYLIKKKTRVMINAWAIGRDPKVWDKAEIFDPTRFENNNVDIRGKDFRILPFGSGRRGCPGIHLGLTTVSLVLAELVHCFDWKLPLGMCCDELDMEEIFGLTTPRKKHLLTKPVYRLAI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01478 496 SUPERFAMILY Cytochrome P450 26 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 PANTHER CYTOCHROME P450 93A3-LIKE 6 494 - -
Vimu8g01478 496 FunFam Cytochrome P450 83B1 15 489 - -
Vimu8g01478 496 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 Pfam Cytochrome P450 29 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 Coils Coil 320 340 - -
Vimu8g01478 496 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vimu8g01478 496 Gene3D Cytochrome P450 17 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01478 496 CDD CYP71-like 57 486 - -
Vimu8g01478 496 Coils Coil 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01478 Vimu-Chr8 20872899 20877104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01478 6 491 Cytochrome P450 AT3G26300 39.437 4.07e-128 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01478 - - var:108345921 941.799