Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01429 ATGAAGATTATTTCGGCTAGACCTTTGCTCACACGAGCTTTGGAAGAGGATGATTTTGACTCTATTATTGACCCAAGGCTTCAGCATGACTATGACCCTAATGAGATGGCACGAATGGTGGCATGTGCCGCAGCTTGCACACGTCATTCAGCAAAGCGCCGACCAAGGATGAGCCAGGTTGTGCGTGCTTTGGAAGGAGATGTGTCTCTGGCAGATCTTAACGAAGGAATCAAACCTGGACACAGCACCATGTACAGTTCTCATGAGAGTTCAGATTATGATACTGTACAGTACAGAGAAGACATGAAAAAGTTCAGAAAAATGGCACTGGGAACTCAGGAATATGGTGCAAGCAGCGAATACAGTGCAGCTACAAGTGAGTATGGTTTAAACCCATCTGGTTCGAGCAGTGAAGCGCAGAGCCGCCAAACCACAAGAGAAATGGAAATGAGAAAGATGAAGAACAGTCAAGGTTTCAGTGGAAGCTCTTGA 492 0.4593 MKIISARPLLTRALEEDDFDSIIDPRLQHDYDPNEMARMVACAAACTRHSAKRRPRMSQVVRALEGDVSLADLNEGIKPGHSTMYSSHESSDYDTVQYREDMKKFRKMALGTQEYGASSEYSAATSEYGLNPSGSSSEAQSRQTTREMEMRKMKNSQGFSGSS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01429 163 MobiDBLite consensus disorder prediction 114 163 - -
Vimu8g01429 163 MobiDBLite consensus disorder prediction 115 143 - -
Vimu8g01429 163 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 6 135 IPR047117 -
Vimu8g01429 163 Gene3D Transferase(Phosphotransferase) domain 1 2 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01429 Vimu-Chr8 20435105 20436776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01429 6 115 Trihelix Transcription Factor Family AT5G38560 45.455 1.74e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01429 - - gmx:100781944 290.041