Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01406 ATGGCCACCATTCCTCACCAATGGAATACCTTTTCACTCTCTCTCCTCATTCTCTCCGTCACCCTCTTCCAAAACCTAACCCCCAATTCCTCTCCTCCCCCTCCCAATTACATCGTTGCCTTCCGCCACTACGCCGCCGTCGACAGCCACCGCGCCTACCTCGAATCTGCCCTCCGCCCTGAGGGATGGCGCTGGATCCCGCGCCAGAACCCGGCGGCGCAGTTCCCAACTGATTTCGGGCTGGTGGCCATCGAGGATTCCGGGGTGGTAGACGAGATTCGGAAACTGGGGTCGGTTAAATACGTGAGCTTGGACGTGAGCTACAAGAGGGGTTTGATGACGATGGATCAGAGACGCAACAAGAAGGTTGGGGCGTTCGAGGATGGGACGAAGAAGCGCCCCGGTAAGATCTTCACTGCGATGTCGTTTTGCGAGGCCGAAGAAGATGAAAAAAGTGTTGGCAATCACAGCAGTTCCATCAAGTGGGGGCGGGAATTGATGATGCAGGTTAAAATTTATGGTTTTCTGATCTTGGGTATTTGGGGGAACGAGAAAGATTTAGACTTTGATCGGGTACCTTTGGTTATGGCTGCTTTTGGGTTTTGGCAGAGATCACAAGTTACTTCAATGTTTGGGGCTGAGGATCTCTGGGCGAAAGGGTACACTGGTGCCAAGGTCAAGATGGCTATATTTGATACTGGCATTCGGGCTGATCACCCTCATTTTCGTAACATCAAGGAGCGTACTAATTGGACCAATGAAGATACGTTGAATGATAATCTTGGACATGGGACTTTTGTTGCGGGTGTAATTGCTGGTGTAGATTCTGAGTGCCTTGGTTTTGCACCAGACACAGAGATTTATGCATTTCGGGTGTTCACTGATGCACAGGTATCATATACATCATGGTTCCTTGATGCCTTCAACTATGCAATTGCAACCAATATGGATGTGTTAAATTTGAGCATAGGTGGACCTGATTACTTGGATCTCCCGTTTGTTGAAAAGATATGGGAGATAACAGCAAATAATATAATCATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAACAATCCAGCTGATCAAAGTGATGTTATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCCTCCTTTTCCTCACGTGGCATGAGTACGTGGGAGCTTCCTCATGGTTATGGCCGTGTAAAGCCAGACATAGTTGCATATGGACGGGACATTATGGGATCAAAAATTAGTGCAGGCTGTAAAAGCTTATCAGGAACTAGTGTTGCAAGTCCTGTAGTTGCTGGTGTTGTATGTTTGCTTGTCAGTGTCATTCCTGAATCTGAGAGAAAAAGTATCTTAAACCCAGCAAGCATGAAACAAGCATTGGTTGAGGGTGCTGCAAAGCTTTCTGGGCCTAACATGTATGAGCAGGGTGCTGGCAGAGTTGATCTGTTAGCATCGTATGAGATTCTTAAGAGCTACAAACCTAGGACGAGCATATTTCCCAGTGTTCTCGATTATACAGATTGTCCTTACACATGGCCATTTTGTCGTCAGCCACTCTATGCAGGGGCCATGCCTGTCATCTTCAATGCCACCATTTTGAATGGAATGGGTGTGATTGGATACATTGAAAGTCCACCAACATGGCACCCTTTTGATGAAGAAGGGAATCTTCTGAGCATACATTTTACTTATTCGGAGATAATTTGGCCTTGGACTGGTTATTTGGCTCTTCACATGCAGATCAAGGAAGAAGGTGCACAATTTTCTGGTAGGATTGAAGGTAATGTAACTCTTAAGGTTTCTAGCCCTCCAGCTCAAGGAGAGAAGGACCCTCAAGTTAGCATTTGTGTGCTTCAATTAAAATTAAATGTGGTACCAACACCACAACGATCTAAACGAATTTTGTGGGATCAGTTTCACAATATCAAATACCCACCTGGATATATTCCTAGAGATTCCTTGGACGTTCGTAATGACATTCTTGATTGGCACGGGGATCATCTACATACAAATTTTCACATCATGTTCAACATGTTACGAGATGCTGGTTACTATATTGAAACACTTGGTTCTCCTCTTACATGTTTTGATGCTCGGCATTATGGTACACTTTTGTTGGTGGATCTTGAGGATGAGTACTTTCCTGAGGAGATTGAAAAACTAAAAGATGATGTTGTAAATACTGGATTGGGATTAGCTGTCTTTGCTGAATGGTATAATGTAGATTCCATGGTAAAGATGAGATTCTTTGATGACAATACACGGAGCTGGTGGACGCCAGTCACTGGAGGTGCTAACATTCCTGCACTTAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGAGATAAGATTTTGAGTGGTGATTTTTCACTTTTGGGTGAGCAGAATCGATATGCATCTGGGACAAATATAGTGAGGTTTCCAAGGGATGGTTATGTGCATAGCTTTCCCTTAGATAGTTCAGAAAGTGGAGCCACACAGAGTGTGCTGCTATCTTCTGGCTCAACCAAGGCAGATTCTCCAATTCTTGGTCTCGTGGTAATGGGCGAAGGTCGCATAGCTGTGTATGGAGACTCCAATTGTTTGGATAGCAGTCATATGATAACAAATTGTTTTGCCCTTTTGAGGAAAATACTGGATTTTACCAGTGAAGATGTTAGAGATCCAACACTTTTCTCCGATTCAATTAAACAAGACTCTCCTTTGTATGAAGCTGACAATAGATTGCCATCCCGCAGAACTGATGTAAATTTCTCTGCATATTCAGCTATTGTGGGTAAGGAATTGATCTGTGGGACTGACACAAGATTTGAAATTTGGAAAACCAAAGGTTACAACTTGCAAGTAAGAGGAAGAAACAGAAGACTGCCCGGTTATCCTATCATTGATTTGGGAAGGGGTTTCAATTCATCCTCTGGCACTTCTAACATTAAGAAAACCAGGTTGACCGGAAGAAGAAAGGATGATTCTCTGGGGAACAGGTACTTGGGCCTGTTCTATGGAGATGAGCCTGATGCACCTGTGTTGGTTGTTGGTCATTGGTTGGTTCCTTTTGTTGTTGCATTAACTGTTTTTGGCGCATTCGTCAAAAGAGACGAAGACGAAGAAAAGGATCAAGTTCTGGTAGATTGGCCAATATAG 3156 0.4404 MATIPHQWNTFSLSLLILSVTLFQNLTPNSSPPPPNYIVAFRHYAAVDSHRAYLESALRPEGWRWIPRQNPAAQFPTDFGLVAIEDSGVVDEIRKLGSVKYVSLDVSYKRGLMTMDQRRNKKVGAFEDGTKKRPGKIFTAMSFCEAEEDEKSVGNHSSSIKWGRELMMQVKIYGFLILGIWGNEKDLDFDRVPLVMAAFGFWQRSQVTSMFGAEDLWAKGYTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGVDSECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISAGCKSLSGTSVASPVVAGVVCLLVSVIPESERKSILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLASYEILKSYKPRTSIFPSVLDYTDCPYTWPFCRQPLYAGAMPVIFNATILNGMGVIGYIESPPTWHPFDEEGNLLSIHFTYSEIIWPWTGYLALHMQIKEEGAQFSGRIEGNVTLKVSSPPAQGEKDPQVSICVLQLKLNVVPTPQRSKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYIETLGSPLTCFDARHYGTLLLVDLEDEYFPEEIEKLKDDVVNTGLGLAVFAEWYNVDSMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILSGDFSLLGEQNRYASGTNIVRFPRDGYVHSFPLDSSESGATQSVLLSSGSTKADSPILGLVVMGEGRIAVYGDSNCLDSSHMITNCFALLRKILDFTSEDVRDPTLFSDSIKQDSPLYEADNRLPSRRTDVNFSAYSAIVGKELICGTDTRFEIWKTKGYNLQVRGRNRRLPGYPIIDLGRGFNSSSGTSNIKKTRLTGRRKDDSLGNRYLGLFYGDEPDAPVLVVGHWLVPFVVALTVFGAFVKRDEDEEKDQVLVDWPI 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01406 1051 CDD Peptidases_S8_SKI-1_like 217 473 IPR034185 -
Vimu8g01406 1051 Gene3D Peptidase S8/S53 domain 202 489 IPR036852 GO:0004252|GO:0006508
Vimu8g01406 1051 PANTHER PEPTIDASE S8 30 477 - -
Vimu8g01406 1051 SUPERFAMILY Subtilisin-like 204 486 IPR036852 GO:0004252|GO:0006508
Vimu8g01406 1051 FunFam subtilisin-like protease SBT6.1 198 489 - -
Vimu8g01406 1051 Pfam Subtilase family 224 473 IPR000209 GO:0006508|GO:0008236
Vimu8g01406 1051 PRINTS Subtilisin serine protease family (S8) signature 259 272 IPR015500 -
Vimu8g01406 1051 PRINTS Subtilisin serine protease family (S8) signature 426 442 IPR015500 -
Vimu8g01406 1051 PRINTS Subtilisin serine protease family (S8) signature 223 242 IPR015500 -
Vimu8g01406 1051 ProSitePatterns Serine proteases, subtilase family, serine active site. 427 437 IPR023828 -
Vimu8g01406 1051 ProSitePatterns Serine proteases, subtilase family, histidine active site. 263 273 IPR022398 -
Vimu8g01406 1051 ProSiteProfiles Serine proteases, subtilase domain profile. 201 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01406 Vimu-Chr8 20354519 20359691 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01406 297 1021 Subtilisin-like Serine Gene Family AT5G19660 79.533 0.0 1209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01406 K08653 - gmx:100797547 1814.28