Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01364 ATGGCTTCTTCCTTTCGTCCCTCAATTTCTTCCTTCATGTTACCCTCCCTTTCTTCTTGCAACCCTTCTCAAAAGTTCTCTCTTTTTCATCTGGGTAGCGGTATTAGACGGTTTCATGATTTTGGCCTGAAACCTTCTAAGTTTTTGAGGCATGATGATGATAACTGCATGAGGGCGAAGGCATCTGGGAACACGTCCTCAATTGCTGCACCAGAAAATGCGCTGGATTGGGTTAAACATGACAAGAGAAGAATGCTTCATGTTGTGTATCGTGTTGGGGACTTGGACAAGACCATAAAATTTTATACAGAGTGCCTGGGAATGAAGGTTCTCAGACAGCGTGACATGCAAGAGCAGAGACATACTAATGCCTTTCTTGGATATGGGCCTGAGGATGCACACTTTGCTGTTGAACTAACATACAATTATGGGATTGACAAGTATGACATTGGAGATGGATTTGGTCATTTTGGTCTTGCTGTTGATGATATCTCAAGAATAGTGGAACTTGTCAGAGCTAAGGGTGGAAAAATTACTAGAGAGCCTATGCTTGTCAAGGGAGGCAACTCAGTAAATGCATTTATTGAAGATCCTGATGGTTATCAATTTGAACTTTTAGAAAGGGCTCCCTCTCCCGAGCCTTTGTGCAAAGTAATGCTTCGAGTTTGTGATCTTGACCGTTCCATCAAATTTTATGAGAAGGTGAAGGCTTTTGGTATGGAGCTACTTCGAACACAGGATTATCCAGAATCCAAGAAAACAATAGCAATACTGGGATATGGTCCAGAGGAAAAAAGTACTGTCCTGGAGTTGACTTACAACTATGGAGTCACGAAATATGATAAAGGAGATGCTTATGCTCAGATTGCAATTGCTACAGATGATGTGTACCAAACTGCCGAAGCAATTAAACTTGCAGGAGGGAAGATTACTCGGGAACCTGGACCAATACCTGACATAAAGACAAAGATCACATCATGTGAAGATCCTGATGGTTGGAAAACTTGCTACTCCTCAGCATCAACAATGAATCATGGCAGACAAAGCTCAAAGGTACCCTTTGGAGAGAAAGAACTCTTCACTTCATCATTTTTTTCCTTCTCTTCCTTCACCCTCTTCACACCAAATAATCACACCCTCTTCAGTTTCTGCCCCATGTTTTCTACCTTTGAATTCAATGAGCTAAACAATTCCAATTCCTTCACACCAACTGAAGATTCATCTGGCTATTGTGATGTTCTTGAGGACCTTTCTTCAGATTCATCCAATGAGGCATGTGGTGATGAATCAGATGAAGAAGTGAGTTTGGAGGAGTTGCTGCAAGATGGAAAAACAAAGGAGAAAGTTGAAGTATTGGCTGCAATGGTTGGACTTGAAACTACTGATCCAGCAACTGTGCTGAATGAAGTAGTGAGAGTTCTCAAGGTTTTGAAGAAGATAAATCAGTATCAGTTAAGTGCTTAA 1464 0.4133 MASSFRPSISSFMLPSLSSCNPSQKFSLFHLGSGIRRFHDFGLKPSKFLRHDDDNCMRAKASGNTSSIAAPENALDWVKHDKRRMLHVVYRVGDLDKTIKFYTECLGMKVLRQRDMQEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAVDDISRIVELVRAKGGKITREPMLVKGGNSVNAFIEDPDGYQFELLERAPSPEPLCKVMLRVCDLDRSIKFYEKVKAFGMELLRTQDYPESKKTIAILGYGPEEKSTVLELTYNYGVTKYDKGDAYAQIAIATDDVYQTAEAIKLAGGKITREPGPIPDIKTKITSCEDPDGWKTCYSSASTMNHGRQSSKVPFGEKELFTSSFFSFSSFTLFTPNNHTLFSFCPMFSTFEFNELNNSNSFTPTEDSSGYCDVLEDLSSDSSNEACGDESDEEVSLEELLQDGKTKEKVEVLAAMVGLETTDPATVLNEVVRVLKVLKKINQYQLSA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01364 487 CDD GlxI_Ni 85 206 - -
Vimu8g01364 487 PANTHER LACTOYLGLUTATHIONE LYASE 61 337 - -
Vimu8g01364 487 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 84 208 IPR037523 -
Vimu8g01364 487 NCBIfam lactoylglutathione lyase 84 209 IPR004361 GO:0004462|GO:0046872
Vimu8g01364 487 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 217 337 IPR029068 -
Vimu8g01364 487 Gene3D - 56 210 IPR029068 -
Vimu8g01364 487 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 205 IPR004360 -
Vimu8g01364 487 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 218 334 IPR004360 -
Vimu8g01364 487 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 214 340 IPR037523 -
Vimu8g01364 487 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Vimu8g01364 487 ProSitePatterns Glyoxalase I signature 1. 87 108 IPR018146 GO:0004462|GO:0046872
Vimu8g01364 487 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 83 235 IPR029068 -
Vimu8g01364 487 Gene3D - 211 342 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01364 Vimu-Chr8 20090630 20096300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01364 217 333 Calmodulin-binding Proteins AT1G08110 27.273 4.59e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01364 K01759 - gmx:100781439 572.778