Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01361 ATGGGTTGCATTTACTCGCGAGTTTGTATAGGTGATAACTGCAGAGGCTCAAGCATCAACGGAGACCCCGTTGTTAGAACCGCTGACGTCGGCGAAGTGGCCAATTTCTCGCCCACCTCTTCTGACGTTGAAGAAGGTGAAATCAGAGACCAGCTTAACCAATTGAGCATCACGAGGGACTCAGAAGCGGGAATCCGAAGACTGGCTAGGGTTTCGGCGCAGTTCCTGCCGCCGGACGGTTCACGAATCGTTAAAGTGCCTTCTGGGAACTTCGAATTGCGATACTCGTTTTTGTCTCAGCGAGGGTACTATCCTGATGCACTTGATAAAGCGAACCAGGATAGCTTCTGCATCCACACGCCTTTTGGGTTTTTATCTGGACAGGTACGAGTCCTAATGACCACTTTTTTGGTGTCTTCGACGGCCATGTTTGTGAAGCGGAAATTGTGTGAGAATTTGCTCAGGAATTCTAAATTCCGTGGTGATCCTGTTGAGGCTTGTCATGCGGCGTTTTTGGCGACGAATTCGCAGCTGCATGCTGATGTTTTGGATGACAGCATGAGCGGGACGACGGCGATCACGGTGCTGGTGAGGGGGAGGACGATATTCGTGGCGAATTCCGGCGATTCGAGGGCGGTGATCGCGGAGAGGAGAGGGAAGGAGATTGTGGCCGTTGATTTGTCGATTGATCAGACGCCGTTTAGGAGTGATGAGCTTGAGAGGGTGAAGCTCTGTGGGGCGAGGGTTCTTACTTTGGATCAGATTGAGGGGTTGAAGAACCCTGATGTGCAGTGTTGGGGCACTGAGGAGGGTGATGATGGTGACCCTCCGAGGTTGTGGGTGCCCAATGGGATGTACCCGGGGACGGCTTTCACAAGGAGTATTGGTGATTCTATTGCGGAGACTATTGGGGTTGTGGCGAATCCTGAGATTGTTGTGTTTGAGCTCACGCAGGATCACCCTTTCTTTGTGCTTGCTAGTGATGGGGTGTTTGAGTTTCTCTCTAGCCAGAGTGTGGTTGAAATGGGGTATCTGTTGTTGAAATTTGCTTTTATGTGTACTAAAGAAGTTGGTGGCAGATTATTATTTCGTTTCAGTGGCAATCACGATCTGGCACAATTAATGTTGGCTGCAAAATTCAAAGATCCTCGTGATGCTTGTGCTGCAATTGTGGCAGAATCTTATCGACTCTGGCTGCAATATGAAACTCGTACAGATGACATCACTGTCATCATTGTACATGTAAATGGGCTAACTGAATCTACTATTGCTCAGTCGGCTAGTTATGGTGATGTTTTGCGAAAACCTGTGCCACAAGTCGTAGAGGTGACAGGTTCAGAATCCCCTTCCACCTTTGGCTGGAGTGCTAGAAACCAACGTGTAAGACATGACTTGTCAAGGGCGCGCCTCCGAGCACTTGAAAATTCCCTAGAAAATGGGCAAGCTTGGGTTCCTCCCCCTTCTGCCCATAGAAAGACATGGGAAGAAGAAGCACACATAGAGCAGGCCTTGCACGATCATTTTCTCTTCCGAAAACTTACCGATTCTCAGTGTCATGTTCTATTGGATTGCATGCAAAGAGTGGAGGTCGAACCTGGGGATATTATAGTCAAACAGGGGCAGAAATTGAAGTTTACCATTCTTGAACGGAACATGTCTTTGGATCTTGGTGGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAGGTCCTGGCAACTCAGGAAGAAAAAGAAGGAGATGTACCTAGGGTTTTGCAGCGCTACACAGCTGAAAAACTCTCATGTTTTGGAGAGCTTGCTCTAATGTACAACAAACCACTCCAGGCTTCTGTACGTGCTGTAACAAAAGGAACTCTTTGGGCTTTAAAACGAGAAGATTTTCGTGGGATTTTAATGTCAGAATTCTCTAACTTATCGTCATTGAAGTTGCTTCGATCTGTAGATCTCCTCTCAAGGTTATCAATTTTACAACTCAGTCAGATTTCTGACTCCCTTTCTGAAGTTTCCTTCTCAAATGGGCAGACAATAATAGACAACAAGGGATGTGTAAAAATCACTTTTGATTCTGATTTGTTGACGAGTCCAAATGCCTACAGCCTCAAGCCTGACATCCAAAACGAGGAGGATGATGTTCAGAGCAGAACAGAACTATCAATAGAGAAGCCTGAGGGAAGCTATTTTGGTGAATGGACCCTTTATGGTGAACGTATTGGTTCCATAAATGCTGTTGCTGTGGGTGATGTTGTATGTGCTTTGCTAACAAAAGACAAATTTGAATCTGTTATTGGCTCCATACAAAAGATTTCTCAGGAAGATCACAAGTACGTTTTAGATAATTCCATGGAGTTGACTGGAAGAAATTATGATTTTTCATCCCTTGATAAAGTCCAGCTTTCAGATTTGGAGTGGAGAAAGACACTATATTCCACTGACTGTTCCGAAATAGGGGTTGCAAATTTAAAGGAATCAGTCTTGAAAGAGAAAGATTTGATTAAGAGTTTGGGCTCTTCAGTTAGTATACCACAGGTTTTATGCACTTGTGCTGATAGCATGTATGCTGGAATACTGCTAAATACTCACCTTGCTTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTTAGTGAATCAGCCGCACGGTTTTGTGCTGCATCTGTTGTCACTGCTTTAGAAGACTTGCACAAGAATGGTGTTCTCTACAGAGGTGTGTCACCCGATGTTTTGATGTTGGAGCAAACAGGACAGATACAGCTGGTGGACTTCAGATTTGGAAAACAGCTTTCTGGCGAGAGAACATTCACAATTTGTGGGATGGCAGATTCTCTGGCTCCAGAGATTGTTTTGGGAAAAGGCCATGGTTTCCCTGCCGACTGGTGGGCATTGGGGGTTTTAATATATTTTATGTTACGTGGTGAGATGCCATTTGGATCATGGAGAGAAAATGAACTCGATACAGTTGCCAAAATTGCAAAAAGGAAGCTACACCTTCCCGAGAGTTTCAGCTCTGAAACGGTTGATCTTATCTCCAAGCTTCTTGAAGTGGAAGAAAACAATAGACTTGGAAGTCAAGGTCCTGATTCTGTCAAGAGTCACCCATGGTTTAAGGGTATTGATTGGGAAGGGATTAGAAGCCGCACTTTTCCTGTTCCTCAGGAAATTATTTCTCGTATATCACAGTACTTGGAAGTTCATTCTGAGGATTGTAGTACTGGCTATCCGGGCTCGCCTTTGCAGGAGGTAGAAGAACTTAATGTGCCTGAGTGGCTTGAGGACTGGTAG 3285 0.4527 MGCIYSRVCIGDNCRGSSINGDPVVRTADVGEVANFSPTSSDVEEGEIRDQLNQLSITRDSEAGIRRLARVSAQFLPPDGSRIVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGFLSGQVRVLMTTFLVSSTAMFVKRKLCENLLRNSKFRGDPVEACHAAFLATNSQLHADVLDDSMSGTTAITVLVRGRTIFVANSGDSRAVIAERRGKEIVAVDLSIDQTPFRSDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVFELTQDHPFFVLASDGVFEFLSSQSVVEMGYLLLKFAFMCTKEVGGRLLFRFSGNHDLAQLMLAAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHVNGLTESTIAQSASYGDVLRKPVPQVVEVTGSESPSTFGWSARNQRVRHDLSRARLRALENSLENGQAWVPPPSAHRKTWEEEAHIEQALHDHFLFRKLTDSQCHVLLDCMQRVEVEPGDIIVKQGQKLKFTILERNMSLDLGGEGDCFYVVGSGEFEVLATQEEKEGDVPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEVSFSNGQTIIDNKGCVKITFDSDLLTSPNAYSLKPDIQNEEDDVQSRTELSIEKPEGSYFGEWTLYGERIGSINAVAVGDVVCALLTKDKFESVIGSIQKISQEDHKYVLDNSMELTGRNYDFSSLDKVQLSDLEWRKTLYSTDCSEIGVANLKESVLKEKDLIKSLGSSVSIPQVLCTCADSMYAGILLNTHLACPLSSILSSPFSESAARFCAASVVTALEDLHKNGVLYRGVSPDVLMLEQTGQIQLVDFRFGKQLSGERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLHLPESFSSETVDLISKLLEVEENNRLGSQGPDSVKSHPWFKGIDWEGIRSRTFPVPQEIISRISQYLEVHSEDCSTGYPGSPLQEVEELNVPEWLEDW 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01361 1094 Gene3D - 90 416 IPR036457 -
Vimu8g01361 1094 Gene3D Phosphorylase Kinase; domain 1 823 866 - -
Vimu8g01361 1094 ProSiteProfiles PPM-type phosphatase domain profile. 94 415 IPR001932 -
Vimu8g01361 1094 Gene3D Transferase(Phosphotransferase) domain 1 867 1052 - -
Vimu8g01361 1094 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 492 1053 - -
Vimu8g01361 1094 SUPERFAMILY PP2C-like 82 417 IPR036457 -
Vimu8g01361 1094 SMART cnmp_10 509 649 IPR000595 -
Vimu8g01361 1094 SMART cnmp_10 652 780 IPR000595 -
Vimu8g01361 1094 ProSiteProfiles cAMP/cGMP binding motif profile. 726 782 IPR000595 -
Vimu8g01361 1094 Gene3D Jelly Rolls 639 785 IPR014710 -
Vimu8g01361 1094 SMART serkin_6 737 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g01361 1094 Gene3D Jelly Rolls 476 634 IPR014710 -
Vimu8g01361 1094 CDD CAP_ED 509 635 IPR000595 -
Vimu8g01361 1094 Pfam Cyclic nucleotide-binding domain 557 636 IPR000595 -
Vimu8g01361 1094 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 89 358 - -
Vimu8g01361 1094 ProSiteProfiles cAMP/cGMP binding motif profile. 509 635 IPR000595 -
Vimu8g01361 1094 Pfam Protein phosphatase 2C 144 342 IPR001932 -
Vimu8g01361 1094 SMART PP2C_4 90 413 IPR001932 -
Vimu8g01361 1094 SUPERFAMILY Protein kinase-like (PK-like) 822 1066 IPR011009 -
Vimu8g01361 1094 SUPERFAMILY cAMP-binding domain-like 490 636 IPR018490 -
Vimu8g01361 1094 ProSiteProfiles Protein kinase domain profile. 737 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g01361 1094 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 483 640 - -
Vimu8g01361 1094 SUPERFAMILY cAMP-binding domain-like 645 774 IPR018490 -
Vimu8g01361 1094 Pfam Protein kinase domain 824 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g01361 1094 CDD PP2Cc 110 415 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01361 Vimu-Chr8 20070977 20080693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01361 1 1094 PP2C-type Phosphatase Gene Family AT2G20050 61.405 0.0 1352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Vimu8g01361 Pkinase 7.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01361 - - gmx:100799821 1794.25