Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01286 ATGGGCCGGCGAAAGAGCAACAATAATCAGTGTTCCTCTAGCAACGAAGACACAACCATGAGTAACCACCTTCGCTTTGAGGATGCCGAGGAGGCTGTCGAAGAGAGTTCCAACCTCGACCAATCCATGTGTGACATCGATGAATCCGATGATAAAACCAGTGCCGACTACTATTTTGATTCCTACTCTCATTTTGGAATTCATGAAGAAATGTTGAAGGACACTGTAAGAACTAAGACATATCAAAATGTTATTTACCAGAATAAGTTTCTATTCAAGAATAAAGTAGTTCTTGATGTTGGAGCTGGGACTGGGATTTTATCACTATTTTGTGCCAAAGCGGGGGCAGAACATGTCTATGCGGTTGAGTGCTCCCATATGGCTGACATGGCAAAGGAGATTGTTGAAACAAATGGTTTCTCTAATGTTGTGACTGTTCTGAAGGGGAAGATTGAAGAAATTGAGCTTCCAGTTCCTAAAGTTGATATAATAATTTCCGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGTGACAAATGGCTTGCTGATGATGGAGTTGTGTTACCTGATAGAGCATCCCTTCATCTCACTGCCATTGAAGATGCAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTAACATGAGCTGCATCAAGAAGCAAGCCATAATGGAGCCTCTTGTTGACACAGTTGACCAGAATCAGATTGCTACAAATTGCCAACTACTCAAGACAATGGATATCTCAAAGATGGCTCCTGGAGATGCTTCATTCACAGCACCTTTTAAGCTTGTAGCTGAACGTGATGACTATATTCATGCCCTTGTTGCATACTTTGATGTGTCGTTCACAAAGTGTCATAAATTGATGGGCTTCTCTACAGGACCAAAATCACGAACTACACATTGGAAACAAACAGTCCTATATCTGGAAGACATCTTGACCATTTGTGAGGGGGAGGCAATTGTAGGGAGCATGACTGTTGCACCAAATAAAAAGAATCCCCGCGATGTTGATATAATGGTTAAGTATTCATTGAATGGAAAGCGATGCAATGTTTCAAGGGTTCAGTACTACAAGATGCGTTGA 1131 0.4058 MGRRKSNNNQCSSSNEDTTMSNHLRFEDAEEAVEESSNLDQSMCDIDESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVETNGFSNVVTVLKGKIEEIELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLADDGVVLPDRASLHLTAIEDADYKEDKIEFWNNVYGFNMSCIKKQAIMEPLVDTVDQNQIATNCQLLKTMDISKMAPGDASFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPKSRTTHWKQTVLYLEDILTICEGEAIVGSMTVAPNKKNPRDVDIMVKYSLNGKRCNVSRVQYYKMR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01286 376 Pfam Ribosomal protein L11 methyltransferase (PrmA) 91 166 - -
Vimu8g01286 376 MobiDBLite consensus disorder prediction 1 20 - -
Vimu8g01286 376 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 55 356 IPR025799 GO:0016274|GO:0018216
Vimu8g01286 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 375 IPR029063 -
Vimu8g01286 376 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 19 363 IPR025799 GO:0016274|GO:0018216
Vimu8g01286 376 FunFam probable protein arginine N-methyltransferase 1 46 198 - -
Vimu8g01286 376 Gene3D Vaccinia Virus protein VP39 46 198 IPR029063 -
Vimu8g01286 376 FunFam Blast:Protein arginine N-methyltransferase 1 200 376 - -
Vimu8g01286 376 CDD AdoMet_MTases 97 197 - -
Vimu8g01286 376 MobiDBLite consensus disorder prediction 1 45 - -
Vimu8g01286 376 Gene3D - 200 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01286 Vimu-Chr8 19558407 19561898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01286 6 339 C2H2 Transcription Factor Family AT3G12270 36.464 8.99e-66 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01286 K11434 - gmx:100781777 719.539