Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01266 ATGGCGAACTTTGCCAACTTCACTCAGAAACATCATCGCCTTTGGAGGTTTTTCCCACACAAACTCAGATTCCTGCTTTGTTTTCTAGCCTTCCATGTCCACCCCTTCTTTATTCAACTCTGTTATTTTGGGATTCTTTCTCTGTTTGGTTACCTTGCTCTCAAAAACTCAAACCCAAGAACCCCCGTTAGACCAAACGATTTTGATCTCTTTTACACCTCTGTTTCTGCTTCCACTGTTTCTAGCATGGCGGCAGTTGAAATGGAGGTTTTCTCCAATTCTCAGCTCATTCTCCTCACCTTTCTCATGTTTTTCGGCGGGGAAGTTTTCACTTCCATGCTTGACCTTCTATTTGTCAGGTATAAACTCACTCAGTCTGTCAAAAACAGAGATAGCACCAACCCCTTTTCACCCACAGCAGAGAAGCCCCCAGTTCATGACAACCATGTTGAGCTTGGTTTAATATCTATTCCTCACTCTCAACCCGAAAACCAAAAACCTAGTAACGACAGTTATAGACTTAAGTATAACTGTCTTACGTATCTGATTTTTGTAGTTTTAGGTTACTTAGTGGTTGTTCAATTGGTCGGGTTCAGTTTGGTGTCTTTGTACATGATCTTGGTACCTAGTGCAACACAAGTTCTGAAAAACAAAGACATTAAGATTGCAACATTTTCCCTGTTCACCATAGTTTCCACTTTTGCCAGCTGTGGTTTTGTCCCCACCAACGAGAACATGATGGTTTTCAAGAAGAATTCGGGGCTTCTCCTTCTTATACTCCCACAAGTATTTCTAGGTAACACCCTTTACCCTCCATGTTTGAGGGTGGTGATTATGGGTCTAAGAAAGGTGAGCAGAAGAGAGGAATTCTCATACCTGCTGAAGAATTTCAAAGACATTGGGTACGATCATATGCTCTCTGGTCTTCGTTGTTGCTACTTGATTGCTACTGTTTTGTTTTTGAATGTTATACAGTTTATGATATTTTGGTCCATGGAGTGGAAAACGAAAACTATGGAGGGTTTGAATTTTTATGAGAAAGTGGTGGGATCGTTGTTCCAAGTTACAAATGCGAGACACGCTGGTGAATCCGTGTTCGATCTCTCTTCCCTGTCTTCAGCCATATTGGTGGTCTTCGTTGTCATGATGTACCTTCCGTCGTACACAACGTTTTTACCTGTAATGGAGGAGGAGGAGGATGACGCCAAGAGAAAAAGAAAAAACGCAGTGGAGTGTGTTGTATTTTCTCAGCTCTCTTACTTAGCCATTTTCATCATTCTGGTTTGCATGACAGAGAGCAAAAGCTTGAAAGATGATCCACTCAACTTTAACGTCCTCAGCATCACCCTCGAAATCATAAGGCAAGGAATTTTGAATTTTCTCTCTTTCTGCAATATCTTACGTTGA 1407 0.4144 MANFANFTQKHHRLWRFFPHKLRFLLCFLAFHVHPFFIQLCYFGILSLFGYLALKNSNPRTPVRPNDFDLFYTSVSASTVSSMAAVEMEVFSNSQLILLTFLMFFGGEVFTSMLDLLFVRYKLTQSVKNRDSTNPFSPTAEKPPVHDNHVELGLISIPHSQPENQKPSNDSYRLKYNCLTYLIFVVLGYLVVVQLVGFSLVSLYMILVPSATQVLKNKDIKIATFSLFTIVSTFASCGFVPTNENMMVFKKNSGLLLLILPQVFLGNTLYPPCLRVVIMGLRKVSRREEFSYLLKNFKDIGYDHMLSGLRCCYLIATVLFLNVIQFMIFWSMEWKTKTMEGLNFYEKVVGSLFQVTNARHAGESVFDLSSLSSAILVVFVVMMYLPSYTTFLPVMEEEEDDAKRKRKNAVECVVFSQLSYLAIFIILVCMTESKSLKDDPLNFNVLSITLEIIRQGILNFLSFCNILR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01266 468 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 29 453 - -
Vimu8g01266 468 Pfam Cation transport protein 175 388 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01266 Vimu-Chr8 19469542 19472739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01266 55 453 Inorganic Solute Cotransporters AT4G10310 47.101 2.58e-118 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01266 K24976 - gmx:100797835 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01266 8 19469542 19472739 Vimu8g01266 8 19469542 19472739 ECH