Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01265 ATGATCATGAACAACACCCTCTTCTTTTTTTCTACTCTTTTCCCACGCATCCTTCGTTTTCTACCGTTGCATTTCCACCCTTTCTTCTTTCACCTTTGCTATTTCATCGTACTTTCTGTCATAGGTTTTCTCGGTCTCAAGGTTTCAAACCCAAGGACCCCTTCTAGCCCTAATGACTTGGATCTTTTCTACACCTCAGTTTCTGCTTCCACAACTTCTAGCATGGTAGCCCTAGAAATAGAGCTTTTCTCCAATTCTCAACTCATTCTCCTCACCCTCCTCATGTTTCTTGGTGGGGAAGTTTTCACTTCCATTCTCGATCTTCTACTTGCTAGGAATAAACTCATCCAAAACAAATTACGTAGCATCAATCCTTCTTCACTCTCAGATGAATCCCCGACCAATGCCACTCATATTGAGCTTGGCTTAGTTTCTATTCCTCACCCAATACCGCAAGACCAGACACTGTCTGATAATGTTGCATCCGTTAGACTTAAGTATAACTGTCTTTGTTATCTGACTTACGTGGTGTTAGGTTACTTTGTTGTGGTTCAGTTTGTTGGATTTAGTTTGGTGTCTTTGTATATGACAGTGGTAGCGAGTGCAAGACAAGTACTGCGAAAGAAAGACATTAACGTTGTAACATTTTCTTTGTTTACTGTCGTTTCCACCTTTGCCAGTTGTGGCTTTGTCCCCACCAACGAGAACATGATGGTTTTCAAGAAGAATTCGGGTCTTCTCCTCCTTCTTCTCCCACATGTTTTTCTCGGTAACGCCCTGTATCCACCGTGTCTGACACTTGTGCTAACGGTTTTGGAAAAAGTTACCAGAAAACAGGAATTCTCACAGTTGCTGAAGAATTCCAACAACCTGGGCTATAGACATTTGCTCTCTGTTTATCGTTGTTGTCTCCTGGTTGGTACAGTGTTTGGTTTGAACGTTATACAGTTTGTGATGTTTTGCTCCGTTGAATGGAAATCCGAAATCATGGAGGGTCTGAATTTGTATGAGAAAGTGGTAGCGTCACTGTTTCAAGTTTCAAACGCCAGACACGCCGGTGAATCTGTTTTTGATCTCTCTTCCATCTCTTCAGCCATATTAGTCCTCTTCATTGTGATGATGTACCTTCCGCCATATACTACATTTTTACCTGCAAGGGAGGAGGAAGATGACGCCAAGAGAAAAAGAAAAAGCACAGTGGAGTGTGTTGTATTTTCTCAGCTCTCTTACTTAGCCATTTTCATCATTCTGGTTTGCATGACAGAGAGCAAAAGCTTGAAAGAGGATCCACTCAACTTTAACGTCCTCAGCATCACCCTCGAAATCATAAGGCAAGGAATTTTGAATTTTCTCTCTTTCTGCAATATCTTACGTTGA 1377 0.4168 MIMNNTLFFFSTLFPRILRFLPLHFHPFFFHLCYFIVLSVIGFLGLKVSNPRTPSSPNDLDLFYTSVSASTTSSMVALEIELFSNSQLILLTLLMFLGGEVFTSILDLLLARNKLIQNKLRSINPSSLSDESPTNATHIELGLVSIPHPIPQDQTLSDNVASVRLKYNCLCYLTYVVLGYFVVVQFVGFSLVSLYMTVVASARQVLRKKDINVVTFSLFTVVSTFASCGFVPTNENMMVFKKNSGLLLLLLPHVFLGNALYPPCLTLVLTVLEKVTRKQEFSQLLKNSNNLGYRHLLSVYRCCLLVGTVFGLNVIQFVMFCSVEWKSEIMEGLNLYEKVVASLFQVSNARHAGESVFDLSSISSAILVLFIVMMYLPPYTTFLPAREEEDDAKRKRKSTVECVVFSQLSYLAIFIILVCMTESKSLKEDPLNFNVLSITLEIIRQGILNFLSFCNILR 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01265 458 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 24 443 - -
Vimu8g01265 458 Pfam Cation transport protein 171 376 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01265 Vimu-Chr8 19461362 19463248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01265 47 443 Inorganic Solute Cotransporters AT4G10310 49.034 2.82e-123 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01265 K24976 - gmx:100786243 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01265 8 19461362 19463248 Vimu8g01265 8 19461362 19463248 ECH