Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01192 ATGGTCTCAATCTCCAAAATTTTGCTTTCTTTACTTTTAACAACAGTTTTTTCTTTGCAGTTGAAAGGTAGTGAAGATGAAGTTGTGCCTTCCGAAGTGGAAGAAGGGCTTCTTCCACGAAAAGTACACGTTGCAATATCAAATTTTTTGGTTTCGAAAGATTTGACACTTCATTGCAGAGACAAGCACAATGATGTTGGAACTCACATATTGAAGTATGGAGAAAGATACGATTTTGATTTTAGACCTAATTTCTTTGCGAAGCTTACTTTGTATTATTGTAGCTTTACATGGGTAGGAGCAAGTCATTCTTTTGACGTTTATAATCAAAATAAGGATGATTGCAATCAATGCGCATGGAACATATTAGAGAGTGGACCTTGCAAGGTTTTTCCCAAACAATGCTATGCGTGGAGAGACTAG 423 0.3641 MVSISKILLSLLLTTVFSLQLKGSEDEVVPSEVEEGLLPRKVHVAISNFLVSKDLTLHCRDKHNDVGTHILKYGERYDFDFRPNFFAKLTLYYCSFTWVGASHSFDVYNQNKDDCNQCAWNILESGPCKVFPKQCYAWRD 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01192 140 Pfam Plant self-incompatibility protein S1 43 138 IPR010264 -
Vimu8g01192 140 PANTHER - 39 130 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01192 Vimu-Chr8 18890792 18891214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01192 22 130 Carbohydrate Esterase AT3G16970 31.304 4.08e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01192 - - pvu:PHAVU_004G004200g 130.183