Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01191 ATGGTAATAATCTCCAAAATTGCGTTATTACATTTTTTGCTTTTAACAACACTTTTTTCTTTGCAACCGAAAGGGAGTGAAGATGAAGTTCTACCTTTAGAAGTAGAAGATAACATTTTTAATCCTTCTAGAGTATACATTAAAATCGTCAATTCCATGGTTTTGAAGAACTTGACTCTCCATTGCCAAGACAAACACCATGATCTTGGTATTCACATTTTGAATTATCATGATGCATTCAAATTTAGTTTTAAACCTAGTCCCATTATTAAGGTTACTTTGTACTTTTGTCGCTTTGTATGGGAACAAACACTTCATTATTTTGATATTTATAAAGAAACTAGAGATGATTGTACTGAATGTGTATGGAACATATTCGAGACTGGACCATGTTTGATGCAGCCCAGGTCTAATAAATGTTATGCTTGGAATAAATAG 438 0.3196 MVIISKIALLHFLLLTTLFSLQPKGSEDEVLPLEVEDNIFNPSRVYIKIVNSMVLKNLTLHCQDKHHDLGIHILNYHDAFKFSFKPSPIIKVTLYFCRFVWEQTLHYFDIYKETRDDCTECVWNIFETGPCLMQPRSNKCYAWNK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01191 145 PANTHER - 45 134 IPR010264 -
Vimu8g01191 145 Pfam Plant self-incompatibility protein S1 47 143 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01191 Vimu-Chr8 18873492 18873929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01191 24 144 Carbohydrate Esterase AT3G16970 34.351 1.36e-21 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01191 - - pvu:PHAVU_004G004500g 130.183