LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu8g01189	ATGTCGAGAATTACAGCAGTAGGTTGTTTGTTTTTAGCAATATTTGTTGGAGTGCAATTGAAGTGTGGTGAGAGTGGTGTTCCTGTTCTTCCGACCAAAGTAACAGTTCAAATAACGAATCGCTTAAGCGAGAGATATTTGGCTGTTCATTGCAAAGACAAAAACACTGATCTTGGGGTACATCAACTCAATGTTGGTGAAACATATAGTTTTAAATTCTTTCCTAAGTATTATTTTCCTACGACATTGTACTTTTGTCATTTTACTTGGTTGGAAGCAGATCATTATTTTGACATATATGTCCAAGATCGAGATGGATACTGCAGTGATAATACTTGTATTTGGGAGATATTTGCTGATGGACCATGCCGCACAAATAAAGATCCTCGACATTGCTATGGATGGAATCCACCCTCTGCAGCCCAACAAAGGAACAACACTTTACCTGTATGA	453	0.3797	MSRITAVGCLFLAIFVGVQLKCGESGVPVLPTKVTVQITNRLSERYLAVHCKDKNTDLGVHQLNVGETYSFKFFPKYYFPTTLYFCHFTWLEADHYFDIYVQDRDGYCSDNTCIWEIFADGPCRTNKDPRHCYGWNPPSAAQQRNNTLPV	150

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu8g01189	150	PANTHER	-	31	130	IPR010264	-
	Vimu8g01189	150	Pfam	Plant self-incompatibility protein S1	35	135	IPR010264	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu8g01189	Vimu-Chr8	18856082	18856534	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu8g01189	16	139	Carbohydrate Esterase	AT3G16970	39.130	3.96e-20	79.3

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu8g01189	-		-	pvu:PHAVU_004G003100g	195.282

Showing 1 to 1 of 1 entries