Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01189 ATGTCGAGAATTACAGCAGTAGGTTGTTTGTTTTTAGCAATATTTGTTGGAGTGCAATTGAAGTGTGGTGAGAGTGGTGTTCCTGTTCTTCCGACCAAAGTAACAGTTCAAATAACGAATCGCTTAAGCGAGAGATATTTGGCTGTTCATTGCAAAGACAAAAACACTGATCTTGGGGTACATCAACTCAATGTTGGTGAAACATATAGTTTTAAATTCTTTCCTAAGTATTATTTTCCTACGACATTGTACTTTTGTCATTTTACTTGGTTGGAAGCAGATCATTATTTTGACATATATGTCCAAGATCGAGATGGATACTGCAGTGATAATACTTGTATTTGGGAGATATTTGCTGATGGACCATGCCGCACAAATAAAGATCCTCGACATTGCTATGGATGGAATCCACCCTCTGCAGCCCAACAAAGGAACAACACTTTACCTGTATGA 453 0.3797 MSRITAVGCLFLAIFVGVQLKCGESGVPVLPTKVTVQITNRLSERYLAVHCKDKNTDLGVHQLNVGETYSFKFFPKYYFPTTLYFCHFTWLEADHYFDIYVQDRDGYCSDNTCIWEIFADGPCRTNKDPRHCYGWNPPSAAQQRNNTLPV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01189 150 PANTHER - 31 130 IPR010264 -
Vimu8g01189 150 Pfam Plant self-incompatibility protein S1 35 135 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01189 Vimu-Chr8 18856082 18856534 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01189 16 139 Carbohydrate Esterase AT3G16970 39.130 3.96e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01189 - - pvu:PHAVU_004G003100g 195.282