Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01188 ATGATGTCGAGAATTACAGCAGTAGGTTGTTTGTTTTTAGCAATATTTGTTGGAGTGCAATTGAAGTGTGGTGAGAGTGCTTTTCCTGTTTTTCCGACCAAAGTAACAATTGAAATAAAGAATCGCTTAACCCAGAGAGATTTGACTGTTCATTGCAAAGACAAGAATACTGATCTTGGGGTGCATAAACTCAATGTTGGTGAAGCATATAGTTTTCAATTCTTTCTTCCTACGACATTGTACTTTTGTCGTTTTACTTGGTTGGAAGGAGATCATAATTTTGACATATATGTCCAAGATCGAGATGGAAACTGCACTGCTAATACTTGTCTTTGGGAGATATCTGCCACCGGACCATGCCGCACAAATAGACTTCCTCCACTGTGCTTTGGATGGAATCCACCTTCTGCAGTGCAACAAAGTAATAACACTTTACTTGTATGA 444 0.3874 MMSRITAVGCLFLAIFVGVQLKCGESAFPVFPTKVTIEIKNRLTQRDLTVHCKDKNTDLGVHKLNVGEAYSFQFFLPTTLYFCRFTWLEGDHNFDIYVQDRDGNCTANTCLWEISATGPCRTNRLPPLCFGWNPPSAVQQSNNTLLV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01188 147 PANTHER - 31 124 IPR010264 -
Vimu8g01188 147 Pfam Plant self-incompatibility protein S1 36 132 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01188 Vimu-Chr8 18847399 18847842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01188 34 136 Carbohydrate Esterase AT3G16970 37.168 6.42e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01188 - - pvu:PHAVU_004G003100g 175.637