Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01186 ATGGATTCATTCTCCAAAATACTATGTTTATTGTTAGTTCTTCTTCTGCAATTGAAAGGTAAAATCACTGCAACTCCAATTATTCCTACAAAAGTTACAGTTGAAATAACCAACAAATTAAACATGAAACATTTGATTGTTAACTGCAAAGACAAGAATAACAATCTGGGTGTTATTGAATTATATGTTAATGAAACATATAGTTTTCGATTTTATCCTAATTACTTTTTTCCTCAAACCTTGTACTTTTGTCACTTCTCATGGTTATATGGTGATCATCATTTTGACATTTATGTCGAATATAGGGATTTATGGTGTAACCACAATGTCTGTTCTTGGGAGATTTTTGAGAAAGGACCATGTAAGATTAAATCTGGATCTCGTCAATGTTTTGCATGGGATAAACCTTCTGCAAAAATTAAATAA 426 0.3028 MDSFSKILCLLLVLLLQLKGKITATPIIPTKVTVEITNKLNMKHLIVNCKDKNNNLGVIELYVNETYSFRFYPNYFFPQTLYFCHFSWLYGDHHFDIYVEYRDLWCNHNVCSWEIFEKGPCKIKSGSRQCFAWDKPSAKIK 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01186 141 PANTHER - 28 123 IPR010264 -
Vimu8g01186 141 Pfam Plant self-incompatibility protein S1 33 133 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01186 Vimu-Chr8 18815179 18815604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01186 8 137 Carbohydrate Esterase AT3G16970 35.664 1.42e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01186 - - pvu:PHAVU_004G003500g 167.162