Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01185 ATGACGAATCGCTTAAGCGAGAGATATTTGGCTGTTCATTGCAAAGACAAGAAGAGTGATTTTGGGGTGCATCAAGTCAACGTTGGTGAAACATATAGTTTTAAGTTCTATCCTGAGGTTATTTTTCCAACAACATTGTACTTTTGTCATTTTACTTGGTTGGAAGCAGATCATTATTTTGACATATATGTCCAAAAGCGAGATGGATACTGCAATAATAATGTTTGTACTTGGGACATACTTCCTACTGGACCATGCCGTACAAACAAAGATCCTCGACAGTGCTATGGATGGAATCCACCCTCTGCAGTGCAACAAAGTATCGTCACTGCAGTTCCATTTTTTCCTACAAAAGTTTCAGTTGAAATAACAAACAAATTAAGTATGAAGGATTTGCATCTTCACTGCAAAGACAAACATAAAGATTTGGGTATTGTTGACCTAAAGGTTAATGAAACATATCGTTTTCGATTTTATCCTGAGTTCTTTATCCCTACAACCTTGTACTTTTGTCACTTCACATGGTTGCATGCTGATCATCATTTTGACATTTATGTAGAATACAGGGATGTTTATTGTATCCACAATCTCTGTTCCTGGGATATATTTGAGAACGGTCCATCAATATTTATTGGAGTACAATTGAAGTGTTGTGAGAGTGGTATTCCTCTTCGTGAGGTCGAAGTAATAGTTCGAATGACGAATGGCTTAAGCGAGAGATATTTGGCTGTTCATTGCAAAGACAAGAACAATGATCTTGGGTTGCAGCAACTCAATGTTGGTGAAACATATGGTTTTAAGTTCTATCCTGAGATTATCTTTCCTACGAAATTGTTCTTTTGTCATTTTATTTGGTTGGAAGAAGATCATTATTTTGACATATATGTCCAAAAACGAGATGGTTACTGCAATAGTAATCTTTGTACTTGGGACATACTTCCCACTGGACCATGTCGAACAAATAAAGATCCTCGACAGTGCTATGGATGGAATCCACCCTCTGCAGTGCAACAAAGTAACAACACTTTACTTGTATGA 1038 0.3699 MTNRLSERYLAVHCKDKKSDFGVHQVNVGETYSFKFYPEVIFPTTLYFCHFTWLEADHYFDIYVQKRDGYCNNNVCTWDILPTGPCRTNKDPRQCYGWNPPSAVQQSIVTAVPFFPTKVSVEITNKLSMKDLHLHCKDKHKDLGIVDLKVNETYRFRFYPEFFIPTTLYFCHFTWLHADHHFDIYVEYRDVYCIHNLCSWDIFENGPSIFIGVQLKCCESGIPLREVEVIVRMTNGLSERYLAVHCKDKNNDLGLQQLNVGETYGFKFYPEIIFPTKLFFCHFIWLEEDHYFDIYVQKRDGYCNSNLCTWDILPTGPCRTNKDPRQCYGWNPPSAVQQSNNTLLV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01185 345 Pfam Plant self-incompatibility protein S1 121 207 IPR010264 -
Vimu8g01185 345 Pfam Plant self-incompatibility protein S1 231 330 IPR010264 -
Vimu8g01185 345 Pfam Plant self-incompatibility protein S1 2 98 IPR010264 -
Vimu8g01185 345 PANTHER - 230 326 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01185 Vimu-Chr8 18801523 18805637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01185 242 334 Carbohydrate Esterase AT3G16970 43.434 1.09e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01185 - - pvu:PHAVU_004G010300g 179.874