Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01184 ATGTCGAGAATTACAGCAGTAGGTTGTTTGTTTTTAGCAATATTTGTTGGAGTGCAATTGAAGTGTGGTGAGAGTGGTGTTCCTGTTCTTCCGACCAAAGTAACAGTTCAAATAACGAATCGCTTAAGCGAGAGATATTTGGCTGTTCATTGCAAAGACAAAAACACTGATCTTGGGGTACATCAACTCAATGTTGGTGAAACATATAGTTTTAAATTCTTTCCTAAGTATTATTTTCCTACGACATTGTACTTTTGTCATTTTACTTGGTTGGAAGCAGATCATTATTTTGACATATATGTCCAAGATCGAGATGGATACTGCAGTGATAATACTTGTATTTGGGAGATATTTGCAGAGATATTTGGGAGAAAAAATCTTTAG 384 0.3516 MSRITAVGCLFLAIFVGVQLKCGESGVPVLPTKVTVQITNRLSERYLAVHCKDKNTDLGVHQLNVGETYSFKFFPKYYFPTTLYFCHFTWLEADHYFDIYVQDRDGYCSDNTCIWEIFAEIFGRKNL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01184 127 PANTHER - 31 117 IPR010264 -
Vimu8g01184 127 Pfam Plant self-incompatibility protein S1 35 118 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01184 Vimu-Chr8 18795222 18795605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01184 16 117 Carbohydrate Esterase AT3G16970 38.938 2.22e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01184 - - pvu:PHAVU_004G003100g 160.999