Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01183 ATGATGTCGAGAATTACAGCAGTAGGTTGTTTGTTTTTAGCAATATTTGTTGGAGTGCAATTGAAGTGTGGTGAGAGTGGTGTTCCTGTTCTTCCGAACAAAGTAACAGTTCAAATAACGAATCGCTTAAGCCAGAGATATTTGGCTGTTCATTGTAAAGACAAGAACACTGATCTTGGAGAGCATCAAATCAATGTTGGTGAAACATATAGTTTTCAATTCTTTCCTAAGTTTTTTTTTCCTTCGACATTGTACTTTTGTCATTTTACTTGGTTGGAAGAAAATCATTATTTTGACATATATGACCAAGATCGAGATGGCTACTGCGGTAATAATATTTGTACTTGGGACATATTAACCACTGGACCATGTCGCAGTGATAAAGATCCTCGACTCTGCTATGGATGGAATCCACCCTCTGCAGTGCAACAAAGTAACAACACTTTACTTGTATGA 456 0.3706 MMSRITAVGCLFLAIFVGVQLKCGESGVPVLPNKVTVQITNRLSQRYLAVHCKDKNTDLGEHQINVGETYSFQFFPKFFFPSTLYFCHFTWLEENHYFDIYDQDRDGYCGNNICTWDILTTGPCRSDKDPRLCYGWNPPSAVQQSNNTLLV 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01183 151 PANTHER - 32 131 IPR010264 -
Vimu8g01183 151 Pfam Plant self-incompatibility protein S1 36 136 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01183 Vimu-Chr8 18793501 18793956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01183 34 140 Carbohydrate Esterase AT3G16970 42.105 2.31e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01183 - - pvu:PHAVU_004G003100g 190.66