Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01182 ATGATAATACTTTGTTCGTTGTTAGTTCTTCTTCTGCAATTCAAAGGTAGAGTAACTGCAGTTCCAATTCTTCCTACAAAAGTTACAGTTGAAATAACCAACAAATTAAACAACGAATCCTTGACTTTGCACTGCAAAGACAAGTATAACGATAAGGGTGTTGTTACACTCAATGTTAATAAAACATATCGTTTTCGATTTTATCCTAATTATTTCTTTCCTTTAACCTTGTACTTTTGTCACTTCGTATGGATAGAAGCTGAGTATTATTTTAACATTTATGTACAAAAAAGGGATGGATATTGTTTCCATAATCGATGTCCTTGGGAGGTACTTGAGAATGGTCCCTGCAAGATTAAATCTGAATCTCGTGAATGCTTTATATGGAAGACATCTTATGTAGAAAAAAATAATACTTTCTCTTCATAA 429 0.3193 MIILCSLLVLLLQFKGRVTAVPILPTKVTVEITNKLNNESLTLHCKDKYNDKGVVTLNVNKTYRFRFYPNYFFPLTLYFCHFVWIEAEYYFNIYVQKRDGYCFHNRCPWEVLENGPCKIKSESRECFIWKTSYVEKNNTFSS 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01182 142 PANTHER - 25 120 IPR010264 -
Vimu8g01182 142 Pfam Plant self-incompatibility protein S1 29 125 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01182 Vimu-Chr8 18790925 18791353 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01182 15 134 Carbohydrate Esterase AT3G16970 33.835 1.76e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01182 - - pvu:PHAVU_004G003500g 166.777