Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01179 ATGCTTTTTCCTCCTGACAAAGTAGTTGTTTCAATCTACAATGTTATAACTTGGAAGAACTTGACCGTTCATTGCAAAGACAAGCACCATGATCTTGGGACTCACGTATTACAATATGGGGGAAATTATAAATTTAGTTTTAAACCTAATTTCTTTGCGAGGGTTACTTTGTATTTTTGTAGGTTTTCATGGGAAGGAGGAAGTCATTCTTTTGATATTTATGATGAAGATAGAGATGATTGTAGTTTATGTGTATGGAACGTATTAGAGAGTGGACCGTGTATGCACTATGCTAAGTATGATGAGTGTTTTGCGTGGAAACATTAG 327 0.3517 MLFPPDKVVVSIYNVITWKNLTVHCKDKHHDLGTHVLQYGGNYKFSFKPNFFARVTLYFCRFSWEGGSHSFDIYDEDRDDCSLCVWNVLESGPCMHYAKYDECFAWKH 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01179 108 PANTHER - 5 99 IPR010264 -
Vimu8g01179 108 Pfam Plant self-incompatibility protein S1 10 106 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01179 Vimu-Chr8 18767525 18767851 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01179 7 106 Carbohydrate Esterase AT3G16970 35.455 7.96e-16 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01179 - - pvu:PHAVU_004G004400g 114.39