Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01175 ATGGATTCAATCTGGAAAATGATGAGAATAGTTTGTTGGGTGTTAATTCTTCTTGGTGAACATATAAAAGGTGGTGAGAGTATTAATTTCAATAAAAAGGTTACTGTTAAAATAGTGAACAAATTACATTCGAGTAAGATAGGTTATCCAGCATTGACTGTTCACTGCAGAGACAAACTTCATGATCTGCCTCAAGTTACTCTAAAATACAACGAAGTATTTAGTTTTCGATTTCTTCCCAATATCTTTGCTGCAGTAACCTTGTACTACTGTCACTTTCAATGGCCAACTGGTAATTATCATTTTGACATTTATGTTCAAGAGAGGGATTATGACTGTAACGACTTTTTATGTTACTGGAAAATAGCTGAATATGGACCATGTGGTACTATTTACGATGGATCTAATTCTACTGCATGCTTTGCCTGGGGGAAAGCTTTACCAGCAAAAAATTTTACTTTATCTTCATGA 471 0.3418 MDSIWKMMRIVCWVLILLGEHIKGGESINFNKKVTVKIVNKLHSSKIGYPALTVHCRDKLHDLPQVTLKYNEVFSFRFLPNIFAAVTLYYCHFQWPTGNYHFDIYVQERDYDCNDFLCYWKIAEYGPCGTIYDGSNSTACFAWGKALPAKNFTLSS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01175 156 Pfam Plant self-incompatibility protein S1 35 143 IPR010264 -
Vimu8g01175 156 PANTHER - 30 129 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01175 Vimu-Chr8 18746740 18747210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01175 31 143 Carbohydrate Esterase AT3G16970 35.345 7.85e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01175 - - pvu:PHAVU_004G003500g 105.145