LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu8g01175	ATGGATTCAATCTGGAAAATGATGAGAATAGTTTGTTGGGTGTTAATTCTTCTTGGTGAACATATAAAAGGTGGTGAGAGTATTAATTTCAATAAAAAGGTTACTGTTAAAATAGTGAACAAATTACATTCGAGTAAGATAGGTTATCCAGCATTGACTGTTCACTGCAGAGACAAACTTCATGATCTGCCTCAAGTTACTCTAAAATACAACGAAGTATTTAGTTTTCGATTTCTTCCCAATATCTTTGCTGCAGTAACCTTGTACTACTGTCACTTTCAATGGCCAACTGGTAATTATCATTTTGACATTTATGTTCAAGAGAGGGATTATGACTGTAACGACTTTTTATGTTACTGGAAAATAGCTGAATATGGACCATGTGGTACTATTTACGATGGATCTAATTCTACTGCATGCTTTGCCTGGGGGAAAGCTTTACCAGCAAAAAATTTTACTTTATCTTCATGA	471	0.3418	MDSIWKMMRIVCWVLILLGEHIKGGESINFNKKVTVKIVNKLHSSKIGYPALTVHCRDKLHDLPQVTLKYNEVFSFRFLPNIFAAVTLYYCHFQWPTGNYHFDIYVQERDYDCNDFLCYWKIAEYGPCGTIYDGSNSTACFAWGKALPAKNFTLSS	156

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu8g01175	156	Pfam	Plant self-incompatibility protein S1	35	143	IPR010264	-
	Vimu8g01175	156	PANTHER	-	30	129	IPR010264	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu8g01175	Vimu-Chr8	18746740	18747210	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu8g01175	31	143	Carbohydrate Esterase	AT3G16970	35.345	7.85e-16	68.2

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu8g01175	-		-	pvu:PHAVU_004G003500g	105.145

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