Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01148 ATGAATACGACGCCGTTTATGGACAAGCAGATTATGGATCTCACTCATGGATCTTCCACTGTGCAGCAACACAGCAAGGACTTCATCGACCTCATGAAACACGAACCACCGCAGCAACAAAATCATCATCGTGAAGAAGATGACGATGAAGAGGAAGAAGAAAATGCGCGTGGTAATGGGATCAACAAGGACGACATCATTCCCAGTTACGATTTCCAGCCGATTCGCCCTCTCGCCTCTTCCAGTTACGATTCTGCCCCCAATTTCGGTGCTGCATTCTCACGCCCTTGGAACTCCGATTCCAACTCCAAAGTAACTTTTCCCAATTGCTCTTTTGCTTTCAAGCCCCGATTTTTTTTGTCTTTAACGTTTTTGCTCATCAGGTGTTGTGTAGGAGGAGTAATAACTCCTTGTACTGTCATTGTGGTTTTGTCTTCACAAATTTTATGTATCCATCCTTATTTTGTGCAGAATTACAGTTCTCTGGATTCATTGGAACCTGCAAAGGTGATTGTAGAAAAGGACCGAAGTGCTTCTGATGCTTCAATGTTGTCTGACATTGATCGCACGATGAAGAAGCATATGGACAATATGCTTAATGTACTGGAAGGTGTCAGTGCACGGTTAACACAACTAGAAACTAGAACCCACCATCTTGAAAATTCCGTGGATGATTTGAAGGTATCTGTCGGGAATAATCATGGTAGCACTGATGGAAAATTGAGGCAACTGGAGAATATTCTTCGAGAGGTGCAATCAGGGGTGCTAACTATCAAGGACAAGCAAGATATAATGCAAGCTCAGCTGCAATTGGCAAAGCTACAAGTGTCCAATACGAATCAGAAATCAGAAGCTCAATCTAACACAACCACCGATCCTGTGCAGCAAGCTGTTCCTGCTCCCGTGCAATCTCAACCACAGCTTCCTACCCCTGCTAATCTTCCTCAGTCCATCCCTGTTATTCCTCCCCCTAATGCTCCTCCTCAACCTCCTCCACAACAGGGTTTGCCACCACCCCCTCAAGTTCAACTTCCAAGCCAATTCCCTCCAAACCAAATCCAAGCTGCTCCTCCGAGAGATCCATATTTCCCAGCACCTGTTCAGTCTCAGGAAACACCTAATCAGCAATACCAACTTCCTTTATCGCAGCCGCCACATACTCACCCTGGTGCAGCTCCACATCAGCAATATCAACAGACCCCACATCCCCAATACCCTCAGCCGCCACCTCATGTTCCTCAACAGCAGCCACCACCTCATGTTCCTCAACAACAGCCACCATCACATCCATCCATGAATCCATCTCAACTTCAACCTCCTCTGGGGCACCATGTTGAGGAACAACCACCTTATCCTCCTCAGAATTATCCTCCCAATGTCCGCCAGCCACCATCTCAGTCCCCCACCGGTCCTCCTCCTCCTCAACAGTTCTATGGGGCACCATCCCACTCCTATGAACCGCCATCTAGCAGACCCAGTTCAGGCTATTCTTCTGGATATGGTTCCCTATCTGGCTCTGGCCCTGCTGAGCAGTATCGTTATGGCGGGCCACCTCAGTATGGTGGCAATCCTGCACTGAAACCACCACAACTGCCAACTGCTTCAGTTTCTCCTAGTGGTGGAAGCGGTTACCCTCAGCTCCCAACTGCCAGGATACTCCCACAAGCACTCCCTACTGCATCTGCAGTGAGTGGTAGCTCAGGTTCTGCTGGAACTGGAGGAAGGGTTTCCGTTGATGATGTGGTTGATAAAGTTGCTAATATGGGATTCCCCAGAGACCATGTGAGGGCAACAGTTCGGAAGCTGACTGAGAATGGTCAATCAGTGGACCTAAATGCAGTGCTGGATAAGCTCATGAATGATGGTGAAGTCCAACCCCCACGAAGTTGGTTTGGTCGGTAG 1902 0.4826 MNTTPFMDKQIMDLTHGSSTVQQHSKDFIDLMKHEPPQQQNHHREEDDDEEEEENARGNGINKDDIIPSYDFQPIRPLASSSYDSAPNFGAAFSRPWNSDSNSKVTFPNCSFAFKPRFFLSLTFLLIRCCVGGVITPCTVIVVLSSQILCIHPYFVQNYSSLDSLEPAKVIVEKDRSASDASMLSDIDRTMKKHMDNMLNVLEGVSARLTQLETRTHHLENSVDDLKVSVGNNHGSTDGKLRQLENILREVQSGVLTIKDKQDIMQAQLQLAKLQVSNTNQKSEAQSNTTTDPVQQAVPAPVQSQPQLPTPANLPQSIPVIPPPNAPPQPPPQQGLPPPPQVQLPSQFPPNQIQAAPPRDPYFPAPVQSQETPNQQYQLPLSQPPHTHPGAAPHQQYQQTPHPQYPQPPPHVPQQQPPPHVPQQQPPSHPSMNPSQLQPPLGHHVEEQPPYPPQNYPPNVRQPPSQSPTGPPPPQQFYGAPSHSYEPPSSRPSSGYSSGYGSLSGSGPAEQYRYGGPPQYGGNPALKPPQLPTASVSPSGGSGYPQLPTARILPQALPTASAVSGSSGSAGTGGRVSVDDVVDKVANMGFPRDHVRATVRKLTENGQSVDLNAVLDKLMNDGEVQPPRSWFGR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01148 633 MobiDBLite consensus disorder prediction 367 383 - -
Vimu8g01148 633 MobiDBLite consensus disorder prediction 35 69 - -
Vimu8g01148 633 MobiDBLite consensus disorder prediction 559 573 - -
Vimu8g01148 633 MobiDBLite consensus disorder prediction 280 303 - -
Vimu8g01148 633 MobiDBLite consensus disorder prediction 402 434 - -
Vimu8g01148 633 MobiDBLite consensus disorder prediction 482 505 - -
Vimu8g01148 633 Coils Coil 195 215 - -
Vimu8g01148 633 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 632 - -
Vimu8g01148 633 Pfam UBA-like domain (DUF1421) 578 622 IPR010820 -
Vimu8g01148 633 MobiDBLite consensus disorder prediction 304 364 - -
Vimu8g01148 633 MobiDBLite consensus disorder prediction 530 544 - -
Vimu8g01148 633 MobiDBLite consensus disorder prediction 280 577 - -
Vimu8g01148 633 MobiDBLite consensus disorder prediction 1 23 - -
Vimu8g01148 633 MobiDBLite consensus disorder prediction 445 478 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01148 1 363 Trihelix Transcription Factor Family AT5G14540 37.566 7.88e-57 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01148 - - gmx:100777464 709.909