Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01131 ATGCAAACTCTTCTTTCTTTGTCACACTCTCCTTCAACTCCACACTTTCCAAACTTCACACCAAGGCCAAAGTTCCTTCCTCAATTCCATTCCTTCAATACTTTCTCCTTGCCCCCATCTTCTCCTTTGCAGCTCACTGCCATAAAGTCTTCACCTTTCTTCATTTCTTCTCCCAAGCTTGCATCTTTCAGGCTCCTTGCTGCTTCTATCTCTGATGCCAGAAGTGATGAACCAGCCAAAGCTAGTGGGTTGGTTAAAACCCTGCAGCTGGGGGCCATGCTTGCCCTTTGGTACCTCTTGAACATCTACTTCAACATCTACAACAAGCAGGTTCTAAAAGTCTATCCATTTCCAGCCACAGTTACAGCATTTCAATTTGGCTTTGTGTCACTGGTGATTAATTTAATCTGGACTTTCAATCTCCACCCCAGACCAAGCATCACTGGTTCACAGTTTGCAACACTCCTTCCACTGGCTCTGGCTCACACATTAGGGAATGTCTTGACCAACATTAGCCTTTGCAAGGTTGCTGTATCTTTCACTCACACAATCAAAGCTATGGAGCCTTTCTTTACTGTTCTTCTTTCTGCTCTTTTCTTGGGTCAGATGCCTACTTTCTGGGTGTTTTCTTCCCTTATACCAATAGTTGGAGGAGTGGCATTAGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGCTTCATCACTGCTATGGCAGCTAACGTTACAAATCAATCAAGGAACGTTTTGAGCAAAAAAATGATGACTAGTGAAGAGGAAAGTTTGGACATTATCAATCTCTATGGAGTTTTAACAATGATTTCCTTCATGTTTTTGGTTCCATATGCCTTACTTATGGAGGGTGTCAAGTTTTCTCCTTCATACCTGCAATATGCAGTATGTGTACAAATTTTCTGA 918 0.4216 MQTLLSLSHSPSTPHFPNFTPRPKFLPQFHSFNTFSLPPSSPLQLTAIKSSPFFISSPKLASFRLLAASISDARSDEPAKASGLVKTLQLGAMLALWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFVSLVINLIWTFNLHPRPSITGSQFATLLPLALAHTLGNVLTNISLCKVAVSFTHTIKAMEPFFTVLLSALFLGQMPTFWVFSSLIPIVGGVALASMTEVSFNWIGFITAMAANVTNQSRNVLSKKMMTSEEESLDIINLYGVLTMISFMFLVPYALLMEGVKFSPSYLQYAVCVQIF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01131 305 PANTHER SOLUTE CARRIER FAMILY 35 90 296 - -
Vimu8g01131 305 Pfam Triose-phosphate Transporter family 88 299 IPR004853 -
Vimu8g01131 305 SUPERFAMILY Multidrug resistance efflux transporter EmrE 129 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01131 Vimu-Chr8 18295547 18299999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01131 5 299 Antiporters AT5G33320 51.827 4.56e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01131 K15283 - gmx:100819280 430.639