LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu8g01125	ATTGAGTTGTATGTATGTCCACAGGGACAGGGACAGTGGCAGAGAGTAGGAAGAAATTTTGATAGGAAGAAGAAAAAGCTACTAAAACGAAATCTTATCTGTACTCAGTCTAGGATGGACATTGATGACGATTTCACGTTTTGTCAGGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATGTTGCTGATATTTCTATTAAAGAAGAATCTTCAAATGCAACTAGTACTATTCAGGATGGTGGTTTTTTGTGGAAGGATGGTTTATCCAAGGATTCCAACTCTAAGGAGGCTAATGTTGGTTCTTTGTCTTTCACTGTTACTAACACAAGTTCAAGTCAGCCAAATGAATCCAGTCAATCTACCCCAAAATCTGCACCAGGTAAGGCTAACAATTTGTTGTCGAAATTGCAAGAAGAGAAGAATTCTGCTAAGAAGCCAGTGGTTCGGGCCAAAGTTCCTTTTGAAAAAGGCTATAGTCAAATGGACTGGCTCAAGCTCACCCGAACTCATCCAGACCTTGCAGGTTTGAAAGGGAAATCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAAACACAAAACAGAAGGTGACATGTGGACTGTATTAAAAGGTCGTGTTTACAATATATCTCCATATATGAAGTTTCACCCTGGAGGTGTTGATATGTTGATGAAGGCAGTAGGAAAAGATTGCACATCTTTATTCAGTATCCTTCGTTCTTTCTCTTATCGCATTTAA	753	0.3891	IELYVCPQGQGQWQRVGRNFDRKKKKLLKRNLICTQSRMDIDDDFTFCQVSAPVDLETNKLASDVADISIKEESSNATSTIQDGGFLWKDGLSKDSNSKEANVGSLSFTVTNTSSSQPNESSQSTPKSAPGKANNLLSKLQEEKNSAKKPVVRAKVPFEKGYSQMDWLKLTRTHPDLAGLKGKSNKRLISMDEVRKHKTEGDMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKDCTSLFSILRSFSYRI	250

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu8g01125	250	SMART	Cyt_b5_2	189	249	IPR001199	-
	Vimu8g01125	250	ProSitePatterns	Cytochrome b5 family, heme-binding domain signature.	217	224	IPR018506	GO:0020037
	Vimu8g01125	250	SUPERFAMILY	Cytochrome b5-like heme/steroid binding domain	186	240	IPR036400	-
	Vimu8g01125	250	Gene3D	-	184	247	IPR036400	-
	Vimu8g01125	250	Pfam	Cytochrome b5-like Heme/Steroid binding domain	191	241	IPR001199	-
	Vimu8g01125	250	MobiDBLite	consensus disorder prediction	109	133	-	-
	Vimu8g01125	250	ProSiteProfiles	Cytochrome b5 family, heme-binding domain profile.	186	240	IPR001199	-
	Vimu8g01125	250	PANTHER	CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER	39	241	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu8g01125	Vimu-Chr8	18265571	18266755	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu8g01125	184	240	NADPH P450 reductases	AT5G53560	40.351	1.36e-12	61.6

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu8g01125	-		-	ccaj:109814642	319.316

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