Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01125 ATTGAGTTGTATGTATGTCCACAGGGACAGGGACAGTGGCAGAGAGTAGGAAGAAATTTTGATAGGAAGAAGAAAAAGCTACTAAAACGAAATCTTATCTGTACTCAGTCTAGGATGGACATTGATGACGATTTCACGTTTTGTCAGGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATGTTGCTGATATTTCTATTAAAGAAGAATCTTCAAATGCAACTAGTACTATTCAGGATGGTGGTTTTTTGTGGAAGGATGGTTTATCCAAGGATTCCAACTCTAAGGAGGCTAATGTTGGTTCTTTGTCTTTCACTGTTACTAACACAAGTTCAAGTCAGCCAAATGAATCCAGTCAATCTACCCCAAAATCTGCACCAGGTAAGGCTAACAATTTGTTGTCGAAATTGCAAGAAGAGAAGAATTCTGCTAAGAAGCCAGTGGTTCGGGCCAAAGTTCCTTTTGAAAAAGGCTATAGTCAAATGGACTGGCTCAAGCTCACCCGAACTCATCCAGACCTTGCAGGTTTGAAAGGGAAATCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAAACACAAAACAGAAGGTGACATGTGGACTGTATTAAAAGGTCGTGTTTACAATATATCTCCATATATGAAGTTTCACCCTGGAGGTGTTGATATGTTGATGAAGGCAGTAGGAAAAGATTGCACATCTTTATTCAGTATCCTTCGTTCTTTCTCTTATCGCATTTAA 753 0.3891 IELYVCPQGQGQWQRVGRNFDRKKKKLLKRNLICTQSRMDIDDDFTFCQVSAPVDLETNKLASDVADISIKEESSNATSTIQDGGFLWKDGLSKDSNSKEANVGSLSFTVTNTSSSQPNESSQSTPKSAPGKANNLLSKLQEEKNSAKKPVVRAKVPFEKGYSQMDWLKLTRTHPDLAGLKGKSNKRLISMDEVRKHKTEGDMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKDCTSLFSILRSFSYRI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01125 250 SMART Cyt_b5_2 189 249 IPR001199 -
Vimu8g01125 250 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 217 224 IPR018506 GO:0020037
Vimu8g01125 250 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 186 240 IPR036400 -
Vimu8g01125 250 Gene3D - 184 247 IPR036400 -
Vimu8g01125 250 Pfam Cytochrome b5-like Heme/Steroid binding domain 191 241 IPR001199 -
Vimu8g01125 250 MobiDBLite consensus disorder prediction 109 133 - -
Vimu8g01125 250 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 186 240 IPR001199 -
Vimu8g01125 250 PANTHER CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER 39 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01125 Vimu-Chr8 18265571 18266755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01125 184 240 NADPH P450 reductases AT5G53560 40.351 1.36e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01125 - - ccaj:109814642 319.316