Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01107 ATGGCAGCAGAACTTGTTGGTGGTGCTCTTCTTTCCGCTTTTCTTCAGGTTGCATTCGATAAGCTGGCTTCTCCTCAATTCCTAGAATTCTTTCGTGGAAGAAAACTTGATGATAAGCTTCTCGGAAACTTGAACATCATGCTGCACTCCATCAATGCTCTCGCTCATGATGCAGAACAGAAGCAGTTCACAGATCCACACGTTAAAGCATGGCTTTTTTCTGTCAAAGAGGCTCTCTTTGATGCCGAGGATCTCTTGGTTGAAATAGATTATGAACTCACCAGATGTCAAGTGGAAGCTGAATCCGAACCTCATACCTTTACTTACAAGGTATCAAATTTCTTTAACTCTACTTTTAATTCGTTTAACAAGAAAATTGAATCAGAGATGAAAGAAGTCCTAGAAAAACTAGAATATCTTGCAAAGCAAAAGGGTGCTCTTGGCTTGAAAGAGGGTACTTATTCTGGTGATAGATCAGGTATTAAAGTGTCACAGAAATTGCCATCATCTTCTTTGGCGGTTGAAAGTGTTATTTATGGCAGAGATGCCGACAAAGAAATGATCTTTAATTGGCTCACATCTGATACCGACAATCATAACCATCTATCCATACTTTCCATAGTGGGCATGGGTGGGTCGGGTAAGACCACACTCGCCCAGCATGTATACAATGACCAAAGAATGGAGACTAAATTTGATATAAGAGCTTGGGTGTGTGTTTCTGATCATTTTGATGTTTTTACAGTGACAAAAACAATTCTTGAGGCAATTACTAAATCTAAAGATGATAGCGGAGACCTAGAAATGGTTCATGGAAGATTGAAAGGAAAAGTATCTGGAAAGAAATTTCTTCTTGTTTTGGATGATGTTTGGAACGAAAAACTAGAAGAATGGGAAGCTGTGCGAACTCCTCTTAGCTATGGGGCTCCAGGAAGTAGAATTCTTGTCACAACACGTATTGAGAAAGTAGCTTCTAACATGAGATGTGAAGTGCATCACTTAAAGCAATTAGAAGAGAATGAATGCTGGAAAGTTTTTAACAAACAAGCTTTGAAAGATGATGATCTTGAATTAAATGATGAGAAAAAGGAGATTGGTAGAAGGATAGTTGAGAAGTGTAAAGGATTACCTCTTGCTTTGAAAACAATTGGAAGTCTTCTCCGCACAAAGTCATCCATTTTAGATTGGAAGAGCGTATTGGAAAGCCACATATGGGACTTATCGAAAGAAGTTGAACTTATGCCTGCTCTGTTATTGAGTTATCAGCACCTTCCTTCTCACCTCAAGAGATGCTTTGCTTACTGTGCGTTATTTCCAAAAGATCATGAGTTTCTGAAGGAGGAATTAATTTTGTTGTGGATGGGTGAAGGTTTTCTCTATCATTCTCAACAGAACAAGAATTTACTAGAAATTGGTGAACAATATTTCGATGATTTATTAACGAGATCTTTCTTTTTTCCATCAAGCTTCGAATTGCACTTCGTCATGCATGATCTTCTAAATGATTTGGCAAAATATGTTTGTGCAGACTTCTGTTTCAGGTTGAAATTTGATAAAGGAAATTGTATACCCAAAATAACCCGTCATTTTTCATTTGCACACGATGATATAAGATATTTTGATAGTTTTGGGAGTTTAACTGATGCTAAAAGACTGCGTTCATTTGTTCAAATTACAAATGACTGTCTATTTCCCGGTCTTCCTGGTCCATTCGAGATTTTGATTAGTGAAGTGTTCTCTAAGTTGAAGTTTTTACGCGTCTTATCTTTGAAAGGGTATTATGGACTCAAAGAGGTCTCAGATTCTGTAGGTAATCTTAAACATCTCCATTCATTGGACCTTTCTAGTACTAGGATACAAAAACTACCTGACTCAGTAGGTTTGCTCTATAACTTACTAATATTGAGGTTGAATGGTTGTTTAAATTTGAAGGAATTGCCTTCAAGTTTGCATAAACTCACCAAATTGCGTTGCCTAGAATTTGAACGTACAGGGGTGACAAAGATTCCAATGCATTTTGCAGAATTGAAGAATCTTCATGTACTGAATATGTTTTGTGTCGGTAGAAACAGTGAGTTCAGTACTAAGGAGCTAGGAGGAATCAACCTTCATGGAAGGCTATCAATTAATGAGCTGCAAAATATTGTGAATCCTTCGGATGCATTAGAAGCAAATTTGAAAAATAAACACCTTGTGGAGTTAAATTTAATATGGAATTCGAATCACATCCCCGATGATCCAAGGAAAGAGAAGAAAGTGCTTGAGAATCTACAACCTTCTAATCAGTTGGAGCGTTTTTCAATCAGGAGCTATTGTGGTACACAATTCCCAAGTTGGGTATTCGATAATTCGTTATCAAATTTGGTATCCTTAGAGTTAAAGGATTGTAAATATATCTTATGTTTGCCTCCCCTTGGACTATTGTCATCTCTGAAGACCCTCGAGATTACAGCACTTAATGGAATAGTGAGCATTGGTGTTGAATTTTATGGGAACAACACTTCTTCATTCAAGAGCTTGGAAAGATTGTTATTCTTCGACATGAAGGAATGGGAAGAATGGGAATGTAAAACTACTTCTTTTCCACGTCTTGAAGAGCTTGTTATCCATGATTGTCCCAAACTGAAAGGTTTGTCAGAGCAACTTCTTCATTTAAAGGCCCTATCTATTGAGACATGTGATAACCTCATCATTAGGGAACACAACGTAGACACATCAGCGCTTCAATGGTTGAAAACTCACTCATGCCCACTTGTGAATATTCCCATGACCCATTATGATTTCATTCAAGATATGACAATTGTTGGTGGCTGTGACTCTCTTACAATCTTTCAGCTAGATTTCTTTCCAATGCTCAGTTTACTTGTTCTGAGTGGATGCCAAAACCTACAAAAAATTTCACAAGAGCACGCTCATAATCATCTCAAGGAATTGTCAATCTATGAATGTCCTCAATTTGAATCATTTACCAATGAAGGATTATCTGCACCATTGGTTCAAATAATTGACATTCGGCAAGCGGAGAATTTAAAGTTGTTGCCAAAACGGATGCAAATCCTGCTTCCATCTCTTACTGAACTGGAGATAATTAATTGTCCAAAAGTGGAGAAGTTCCCAGATGGAGGTTTGCCATCAAACGTAAAACACTTATCTCTTTCAAGTTTAAAACTTATCGCCTTCCTGCGAGAGAACTTGGATGTCAACACATGTCTTGAAAGCTTATCTATTGACTCTCTTGATGTGGAGTCTTTTCCCGACGATGTTTTGCTGCCACCTTCTCTTACTTCTTTAAAAATCATTCGTTGCCAAAATCTCAAAAAGCTAGACTACAAGCTTCTCTATCACCTCTCCTCTCTCGAACTTGGTGATTGCCCTAACCTCCAATGCTTACCTGAGGAGGGTTTGCCCAAATCCATCTCTTCTCTTCAAATTTGGAGCTGTCCATTGCTCGAGCAGCGTTGTCAGAAGCCTGAAGGCAAAGATTAG 3486 0.3807 MAAELVGGALLSAFLQVAFDKLASPQFLEFFRGRKLDDKLLGNLNIMLHSINALAHDAEQKQFTDPHVKAWLFSVKEALFDAEDLLVEIDYELTRCQVEAESEPHTFTYKVSNFFNSTFNSFNKKIESEMKEVLEKLEYLAKQKGALGLKEGTYSGDRSGIKVSQKLPSSSLAVESVIYGRDADKEMIFNWLTSDTDNHNHLSILSIVGMGGSGKTTLAQHVYNDQRMETKFDIRAWVCVSDHFDVFTVTKTILEAITKSKDDSGDLEMVHGRLKGKVSGKKFLLVLDDVWNEKLEEWEAVRTPLSYGAPGSRILVTTRIEKVASNMRCEVHHLKQLEENECWKVFNKQALKDDDLELNDEKKEIGRRIVEKCKGLPLALKTIGSLLRTKSSILDWKSVLESHIWDLSKEVELMPALLLSYQHLPSHLKRCFAYCALFPKDHEFLKEELILLWMGEGFLYHSQQNKNLLEIGEQYFDDLLTRSFFFPSSFELHFVMHDLLNDLAKYVCADFCFRLKFDKGNCIPKITRHFSFAHDDIRYFDSFGSLTDAKRLRSFVQITNDCLFPGLPGPFEILISEVFSKLKFLRVLSLKGYYGLKEVSDSVGNLKHLHSLDLSSTRIQKLPDSVGLLYNLLILRLNGCLNLKELPSSLHKLTKLRCLEFERTGVTKIPMHFAELKNLHVLNMFCVGRNSEFSTKELGGINLHGRLSINELQNIVNPSDALEANLKNKHLVELNLIWNSNHIPDDPRKEKKVLENLQPSNQLERFSIRSYCGTQFPSWVFDNSLSNLVSLELKDCKYILCLPPLGLLSSLKTLEITALNGIVSIGVEFYGNNTSSFKSLERLLFFDMKEWEEWECKTTSFPRLEELVIHDCPKLKGLSEQLLHLKALSIETCDNLIIREHNVDTSALQWLKTHSCPLVNIPMTHYDFIQDMTIVGGCDSLTIFQLDFFPMLSLLVLSGCQNLQKISQEHAHNHLKELSIYECPQFESFTNEGLSAPLVQIIDIRQAENLKLLPKRMQILLPSLTELEIINCPKVEKFPDGGLPSNVKHLSLSSLKLIAFLRENLDVNTCLESLSIDSLDVESFPDDVLLPPSLTSLKIIRCQNLKKLDYKLLYHLSSLELGDCPNLQCLPEEGLPKSISSLQIWSCPLLEQRCQKPEGKD 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01107 1161 Gene3D - 337 419 IPR042197 -
Vimu8g01107 1161 SUPERFAMILY L domain-like 495 920 - -
Vimu8g01107 1161 Pfam Rx N-terminal domain 11 103 IPR041118 -
Vimu8g01107 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 435 IPR027417 -
Vimu8g01107 1161 Gene3D - 420 506 IPR036388 -
Vimu8g01107 1161 ProSiteProfiles Leucine-rich repeat profile. 608 629 IPR001611 GO:0005515
Vimu8g01107 1161 Gene3D Ribonuclease Inhibitor 711 901 IPR032675 -
Vimu8g01107 1161 Gene3D Ribonuclease Inhibitor 1021 1157 IPR032675 -
Vimu8g01107 1161 SUPERFAMILY L domain-like 907 1152 - -
Vimu8g01107 1161 Gene3D - 160 336 IPR027417 -
Vimu8g01107 1161 Coils Coil 123 143 - -
Vimu8g01107 1161 PRINTS Disease resistance protein signature 277 291 - -
Vimu8g01107 1161 PRINTS Disease resistance protein signature 783 799 - -
Vimu8g01107 1161 PRINTS Disease resistance protein signature 373 387 - -
Vimu8g01107 1161 PRINTS Disease resistance protein signature 204 219 - -
Vimu8g01107 1161 FunFam Probable disease resistance protein At1g61300 162 332 - -
Vimu8g01107 1161 FunFam Probable disease resistance protein At1g63360 421 506 - -
Vimu8g01107 1161 PANTHER DISEASE RESISTANCE PROTEIN RP 52 1026 IPR044974 GO:0006952
Vimu8g01107 1161 Gene3D Ribonuclease Inhibitor 541 710 IPR032675 -
Vimu8g01107 1161 Pfam NB-ARC domain 182 402 IPR002182 GO:0043531
Vimu8g01107 1161 Gene3D - 18 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01107 Vimu-Chr8 18063629 18067114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01107 205 507 WRKY Transcription Factor Family AT5G45050 26.730 3.49e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01107 - - vra:106774688 1817.36