Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01068 ATGAGAGCTTGGATCTACTCTGAATATGGGAACATAGAAGAGGTTCTCAAGTTTGATCCTAATGTGCCCACACCACATCTCATGGAAAACCAAGTGCTTATCAAAGTTGTGGCTGCAGCCATTAATCCAGTAGATTATAAGAGAGCTCTTGGTCATTTCAAGGACATTGACTCTCCTTTACCAACTGCACCAGGGTACGATGTTGCTGGTGTGGTGGTGAAAGTGGGAAATCAAGTGAAGAAATTTAAGGTTGGAGATGAAGTTTATGGTGACATCAATGAGATTACTCTGGACCATCCAAAGACTATTGGCAGTTTAGCTGAATATACTGCAGTTGAAGAGAAAGTATTGGCTCACAAACCCTCCAATTTGAGTTTTGTTGAAGCTGCAAGCCTCCCTTTGGCAATCATAACTGCTTATCAAGGACTTGAAACTGCTCAGTTCTCTGCTGGCAAATCTATACTTGTTCTGGGAGGAGCTGGTGGAGTTGGATCCCTTGTTATTCAGATCGCGAAGCATATATTTGGTGCATCTAAGATAGCAGCTACTGGTAGTAGTGGAAAACTGGAATTGTTGAGAAACTTGGGAGCAGACTTGCCTATAGACTACACAAAAGAGAACTTTGAAGAACTTGCAGAGCAGTTTGATGTGGTGTACGATGCAGTAGGACAAAGTGAAAGGGCATTGAAGGTTGTTAAAGAAGGTGGTAAAGTTGTGACAATAGTGGCACCTGCAACTCCACCAGCTATCCCTTTCTTGCTCACTTCTGATGGTGATTTGCTGGAGAAATTGAGACCTTACTTGGAGAGTGGAGAGGTGAAGCCAATATTGGATCCTAAGAGTCCCTTTCCATTTTCTCAGACAGTGGAAGCATTTTCATATTTGAAGACTAACAAAGCTACTGGGAAAGTGGTCATATATCCCATCCCATAA 933 0.4244 MRAWIYSEYGNIEEVLKFDPNVPTPHLMENQVLIKVVAAAINPVDYKRALGHFKDIDSPLPTAPGYDVAGVVVKVGNQVKKFKVGDEVYGDINEITLDHPKTIGSLAEYTAVEEKVLAHKPSNLSFVEAASLPLAIITAYQGLETAQFSAGKSILVLGGAGGVGSLVIQIAKHIFGASKIAATGSSGKLELLRNLGADLPIDYTKENFEELAEQFDVVYDAVGQSERALKVVKEGGKVVTIVAPATPPAIPFLLTSDGDLLEKLRPYLESGEVKPILDPKSPFPFSQTVEAFSYLKTNKATGKVVIYPIP 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01068 310 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 310 IPR044626 GO:0016628
Vimu8g01068 310 Pfam Alcohol dehydrogenase GroES-like domain 30 91 IPR013154 -
Vimu8g01068 310 Gene3D - 8 306 - -
Vimu8g01068 310 CDD MDR_like_2 1 306 - -
Vimu8g01068 310 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 124 250 IPR036291 -
Vimu8g01068 310 Gene3D - 143 257 - -
Vimu8g01068 310 Pfam Zinc-binding dehydrogenase 195 306 - -
Vimu8g01068 310 SUPERFAMILY GroES-like 1 156 IPR011032 -
Vimu8g01068 310 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 151 172 IPR002364 GO:0008270|GO:0016491
Vimu8g01068 310 SMART PKS_ER_names_mod 10 306 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01068 Vimu-Chr8 17806757 17808036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01068 29 251 Monolignol Biosynthesis Gene Families AT4G37980 25.296 7.24e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01068 K18980 - gmx:100791274 489.189