Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01061 ATGGGTGAGGGAAGAAACATGGTTGCAGTGATGGTAGTTTTAGGTATGTTGGTGGTTTTGTTTGATTTGGTTAATGCAAGAACCTATGTGGTTGGAAAAAAAGATGGTTCGTGCTCAGAGGATATATGTTGGACCTTTAATGTTACTGATTGGCCTAAGGACAAGAACATTGCTTCTGGTGATGTGCTCGTTTTCAATTACAATCCTTCTGTGCACAACGTGGTGTTTGTGGACGAAATAGGATACAAAACATGCACAGTTCCAAAAGATCAAAGATATTCAAGAGTGTATAGAACAGGACATGATCATATTCAACTTCCTGATTTGGGACCAATTCATTTCATTTCCAGCGTCAAAGATGATTGCAAAAGAGGAATCAAAATTGAAATCCGATGA 396 0.3838 MGEGRNMVAVMVVLGMLVVLFDLVNARTYVVGKKDGSCSEDICWTFNVTDWPKDKNIASGDVLVFNYNPSVHNVVFVDEIGYKTCTVPKDQRYSRVYRTGHDHIQLPDLGPIHFISSVKDDCKRGIKIEIR 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01061 131 Pfam Plastocyanin-like domain 44 125 IPR003245 GO:0009055
Vimu8g01061 131 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
Vimu8g01061 131 Gene3D - 38 131 IPR008972 -
Vimu8g01061 131 PANTHER BLUE COPPER PROTEIN 20 130 IPR039391 GO:0009055
Vimu8g01061 131 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01061 Vimu-Chr8 17751805 17753441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01061 10 130 Phytocyanin Superfamily AT4G31840 28.455 5.34e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01061 - - var:108345371 242.662