Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01060 ATGGGAGAGAGAAGACACATTTTTGCAGTAACAATGGTGGTTCTTAGTATGTTGGTGGTTTCAACAGAGATGGTTTATGGAAAGCTGTTTTATGTTGGGAAAAAAGATGGAACATGCTTACAAGACGTATGTTGGGCAAATGGAATCAGTGATTGGCCTAAAAACAAGACCATTAAAGCTGGTGACATTTTAGTATTCAATTACGATCTTTTCACACGTGATGTTACTCTTGTGGACGAGGAAGGATACAGAACATGTAATCCAGGAAAAAATCCAGTAGTGTATCGGACAGGACATGATTATATTCAAGTTCCAGAAGGACCAAGTTACTATATTTGTAGTATCAATCGTCTCTGCCAAAAAGGAACCAAAGTTGCGATCATTCCAGCATAA 393 0.3817 MGERRHIFAVTMVVLSMLVVSTEMVYGKLFYVGKKDGTCLQDVCWANGISDWPKNKTIKAGDILVFNYDLFTRDVTLVDEEGYRTCNPGKNPVVYRTGHDYIQVPEGPSYYICSINRLCQKGTKVAIIPA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01060 130 Gene3D - 39 128 IPR008972 -
Vimu8g01060 130 SUPERFAMILY Cupredoxins 30 128 IPR008972 -
Vimu8g01060 130 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055
Vimu8g01060 130 PANTHER BLUE COPPER PROTEIN 29 127 IPR039391 GO:0009055
Vimu8g01060 130 CDD Plantacyanin 22 129 IPR041844 -
Vimu8g01060 130 Pfam Plastocyanin-like domain 50 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01060 Vimu-Chr8 17747435 17747912 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01060 52 127 Phytocyanin Superfamily AT1G17800 37.662 1.26e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01060 - - pvu:PHAVU_004G014900g 207.608