Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu8g01042 | ATGACAGTTATTATAACAGTGGTGCTAATATTTGTGGGATTTGTGGTTTTGATCATATTTCATGTTTGTATTTCGGAGAGACTATCTAGGAGAGGATCTATGGTTGAGAGGGGTGCAAATGGGGGAAGAAGCATGTCCATAGATGAGTTGGAGAAGCTTCCATGTTATGATTATGTTGCCAAAGGCAACACAAGCAGCCCTGTGGATTGTGCAGTTTGCTTGGAGAGCCTCATCACTGGAGATAAGTGCAGGTTGTTACCTATGTGCAAGCACAGTTTTCATGCTCAATGTGTGGACACATGGCTTCTTAAGACACCCTTATGCCCAATTTGCAGGTGTAATGCTCATTCTCACAGTGAAAACCAAGTTATAGGTAACAGTGACTACTTGGTAGTACCAAATAGTGTGTCTAGGGAGGGCCAAACTGCCACAAGAAGTCAGCAACATGAGAACATGGTGGTCTTGGTACAGCTGAGAGAAAGCCTAGAAAATGGTCCATCAACAAATGTTGTCGTGGAAAATCCAACATTAGGAAGTCATAACTTGGTCAGGGAGGAGTAG | 561 | 0.4314 | MTVIITVVLIFVGFVVLIIFHVCISERLSRRGSMVERGANGGRSMSIDELEKLPCYDYVAKGNTSSPVDCAVCLESLITGDKCRLLPMCKHSFHAQCVDTWLLKTPLCPICRCNAHSHSENQVIGNSDYLVVPNSVSREGQTATRSQQHENMVVLVQLRESLENGPSTNVVVENPTLGSHNLVREE | 186 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu8g01042 | 186 | ProSiteProfiles | Zinc finger RING-type profile. | 70 | 112 | IPR001841 | - | |
Vimu8g01042 | 186 | Pfam | Ring finger domain | 69 | 112 | IPR001841 | - | |
Vimu8g01042 | 186 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 2 | 149 | - | - | |
Vimu8g01042 | 186 | SMART | ring_2 | 70 | 111 | IPR001841 | - | |
Vimu8g01042 | 186 | SUPERFAMILY | RING/U-box | 69 | 127 | - | - | |
Vimu8g01042 | 186 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 32 | 117 | IPR013083 | - | |
Vimu8g01042 | 186 | FunFam | RING-H2 finger protein ATL2K | 45 | 118 | - | - | |
Vimu8g01042 | 186 | MobiDBLite | consensus disorder prediction | 167 | 186 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu8g01042 | Vimu-Chr8 | 17577801 | 17578361 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu8g01042 | 50 | 132 | C3H Transcription Factor Family | AT2G18650 | 45.238 | 6.90e-17 | 75.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu8g01042 | - | K15692 | gmx:102667575 | 306.99 |