Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01036 ATGGGACAAGCTGCATATCTTTCAAAGCATCATTCCCTTGAAAGTGATTATCGAATTGGGTTCTATGTATCAGTACCTGGTAAGTTCTTTGTGATCTTCTCTAAGAAACACATATTCAAAGAAATACTGGTGTTTACTATGCTGCTTAGCTTACTGTTCTTTTCCTCCTTTTCAGTAAAACTTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCTGTCATCACAGGAACTTTCTCAATAATCAAGCAATGTTCTGCTTTGGGATGTTTCCCCAAAGTCAAAATCATTCACACATCATCCAAGACTCATGGCCAGATTTACATTCCTGAGATCAACTGGAGTTTGATGCTGCTTTGCCTGGCTATTACAGTTGGATTTAGAGATACTAAACGCATGGGAAATGCAGCAGGCTTGGCTGTTATAACTGTCATGCTGGTGACCACTTGCTTAATGTCTCTAGTTATAGTCTTATGTTGGCACAAAAGCATTTTGCTGGCAATTTGCTTCATATTGTTCTTTGGCTCCATTGAAGCACTCTATTTCTCAGCATCCCTGATCAAGTTCCTTGAGGGGGCTTGGGTCCCCATTGCCCTCTCATTCATCTTTCTCATTTCCATGTATGTATGGCATTATGGCACAATAAAGAAGTATGAGTTTGATGTTGAGAACAAGGTTCCAATCAACTGGCTCCTCAGTTTAGGCCCCACTCTAGGCATTGTCAGAGTCAAGGGAATTGGCCTCATACACACTGAGCTTGTATCTGGGATCCCAGCTATTTTCTCCCACTTTGTGACCAATCTCCCTGCCTTCCACCAAGTTGTTATCTTCCTCTGCATCAAGTCTGTCCAAGTGCCACATGTGAGACCAGAAGAAAGGTTCTTGGTGGGTAGAGTTGGCCCAAAGGAGTATAGGCTTTACAGGTGCATAGCCAGGTATGGCTACCGTGACATTCACAAGGATGACATGGAGTTTGAGAAGGATCTTGTGTGCAGCATAGCAGAATTCATCAGATCAGACACCTCAGAATATGGCCTAGGATTTGGAAGTTTTGAAGAAGACACAAAGATGACAGTTGTTGGAACTTCAGCATCAAACTTAGAGGGTTCAATAAGGATGTCTGAAGATGATCAACAACAAGATTCTCATATGGAAGGCCCCTCAGAATTGATGGAAGTTAAGCCTTCTCCAGAGAAAGTGAGGAAGAGAGTGAGGTTTGTGGTGCCAGAAAGTCCACAGATTGATTTTGAAACAAGAGAAGAGTTGCTTGAGCTAATGGAAGCAAAAGAAGCTGGAATGGCATTCATTCTGAGTCACTCATATGTTAGAGCAAAAAGTGGATCAAGCTGGTTGAAAAAAGTTGTCATCAATTATGGATATGATTTCTTAAGGAGAAACTCTAGAGGACCAACATATGCTTTAAGCATACCTCATGCATCTACCTTAGAGGTAGGCATGATCTACCATGTATGA 1491 0.4192 MGQAAYLSKHHSLESDYRIGFYVSVPGKFFVIFSKKHIFKEILVFTMLLSLLFFSSFSVKLRWPVLAIAILQAVVGSQAVITGTFSIIKQCSALGCFPKVKIIHTSSKTHGQIYIPEINWSLMLLCLAITVGFRDTKRMGNAAGLAVITVMLVTTCLMSLVIVLCWHKSILLAICFILFFGSIEALYFSASLIKFLEGAWVPIALSFIFLISMYVWHYGTIKKYEFDVENKVPINWLLSLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCIKSVQVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMEFEKDLVCSIAEFIRSDTSEYGLGFGSFEEDTKMTVVGTSASNLEGSIRMSEDDQQQDSHMEGPSELMEVKPSPEKVRKRVRFVVPESPQIDFETREELLELMEAKEAGMAFILSHSYVRAKSGSSWLKKVVINYGYDFLRRNSRGPTYALSIPHASTLEVGMIYHV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01036 496 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 495 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu8g01036 496 Pfam K+ potassium transporter 50 323 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu8g01036 496 MobiDBLite consensus disorder prediction 378 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01036 Vimu-Chr8 17529084 17530841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01036 1 496 Inorganic Solute Cotransporters AT5G14880 69.980 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01036 K03549 - gmx:100793387 863.603