Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01032 ATGGAAAAGTTAGCTGCTAAAAGTAGGAGTAGTCAAGCTAAGGTAATGGGAAGCATAATATCAATATCAGGTGCATTTGTTCTGACTTTCTACAAAGGAACACCAATCGTCAATGCTCACAAACATCTTTCCTTGTCACTTCAAGATCAAATTAACTTTCTTAAATCAGAGGATGCTAGTTGGGCCACTGGTGGCATTCTGCTGATGTCTGACTATATTCTGACTTCAGTATGGTACATTTTAGAGGGACTATTTGGAAAGTTAATGAGCAATGTAATTTATGCCTGGACATTGAATTTAAAGGGGGCTGTCTTTGTAACATCCTTCAGGCCATTTCAAATTGTGATTGCAGTTGCAATGGGGGTCTTGTTCCTTGATGATACTCTGTACATTGGAAGCGTAGTTGGAGCCATAATAGTATCGATTGGCCTTTATGTTGTGTTGTGGGGCAAGGCAACAGAAGAGATTGAGGAAGTTGTTGGTGGCTTGGAATCACTAACTGCTGAGAATGTTCCTCTCTTGCAAAACCAGAGAACTGAAACATCAGAAAAGAATGTTTAA 561 0.3957 MEKLAAKSRSSQAKVMGSIISISGAFVLTFYKGTPIVNAHKHLSLSLQDQINFLKSEDASWATGGILLMSDYILTSVWYILEGLFGKLMSNVIYAWTLNLKGAVFVTSFRPFQIVIAVAMGVLFLDDTLYIGSVVGAIIVSIGLYVVLWGKATEEIEEVVGGLESLTAENVPLLQNQRTETSEKNV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01032 186 PANTHER WAT1-RELATED PROTEIN 82 165 IPR030184 GO:0016020|GO:0022857
Vimu8g01032 186 SUPERFAMILY Multidrug resistance efflux transporter EmrE 74 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01032 Vimu-Chr8 17492018 17495100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01032 1 180 Nodulin-like Gene Family AT5G40230 35.102 5.65e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01032 - - gmx:100790743 239.965