LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu8g01031	ATGGATAGAAGATACTGTTACAAGGATTTGCTTCCTCTGATTGTTCTTGTTGCAAATGAATGCAATAACACAGCTTTGTTCACTCTCTTCAAAGCAGCCACTCTGCAAGGGATGAGTAGCTATGTCTTTGTCTCCTATGCCTATTCCTTGGCCTTTCTTGTTCTTCTTCCTATTACTTTTCTCTACAGAAGATCAAGAGTGGTTCCTCCTCTCAGCTTTTCAATCCTATCGAAAATTGCTCTTCTGGGACTCATAGGGTGTTCATCTCAGATTCTGGGGTATGTTGGGATCAGTTATAGTTCTCCCACACTTTCCTCTGCAATCAGCAACCTCACTCCTGCCTTCACCTTCATACTTGCTGTCATTTGCAGGATGGAAAAGATAGTCATAAGAAGTAGAACTACCCAAGCTAAGATTTGGGGCAGCATTATATCGATATCTGGTGCATTTATTGTGACTTTCTGCAAAGGTCAATCGATCATCATTGCTGATAATTCCCCTTCAATTCAACTTTCACAACCAAATGGGTTTCTTGCTTCAGTAGATACAAATTGGACCTTTGGTGGTCTTCTGCTGACAGCTTGCAATATACTGCTTACTATATGGTTTGTTTTACAGGTTGAAATCTTGAAGGAGTTCCCGGATGAACTAACTATGGTGTTCTTTTACAACTTGTATGCAGCCATTGTAGCTTCAATTGTAGGTTTAATTGGGGAGAAAAATTCAAGTGCCTGGAAAATAAGACCAGACATATCCCTGATCTCTATTGTTTGCACTGGAATATTTAACAAGTTCATGAGTAGTGCAATATATGCCTGGGGAATACACCTAAAGGGGCCTGTATATGTAGCAATGTTCAAGCCTCTCTCAATTGTTATTGCAGTTGCCATGGGTGTTATGTTCCTTGGTGATACTCTATATGTTGGAAGTTTGATTGGAGGCACAGTAATATCAATTGGGTTTTATACTGTGATGTGGGGCAAATCAACTGAACAGAAGGAAGAGGAGGAAGATGTTGGTAGCCAAGAATCACCAATCACTGAGAATGTTCCTCTCTTGCAAAGCTATGCAACTCTAAATTCTACAAAGAAAATAGATGCAAGAGTATAA	1110	0.3991	MDRRYCYKDLLPLIVLVANECNNTALFTLFKAATLQGMSSYVFVSYAYSLAFLVLLPITFLYRRSRVVPPLSFSILSKIALLGLIGCSSQILGYVGISYSSPTLSSAISNLTPAFTFILAVICRMEKIVIRSRTTQAKIWGSIISISGAFIVTFCKGQSIIIADNSPSIQLSQPNGFLASVDTNWTFGGLLLTACNILLTIWFVLQVEILKEFPDELTMVFFYNLYAAIVASIVGLIGEKNSSAWKIRPDISLISIVCTGIFNKFMSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGVMFLGDTLYVGSLIGGTVISIGFYTVMWGKSTEQKEEEEDVGSQESPITENVPLLQSYATLNSTKKIDARV	369

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Vimu8g01031	369	PANTHER	WAT1-RELATED PROTEIN	11	336	IPR030184	GO:0016020\|GO:0022857
Vimu8g01031	369	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	231	329	-	-
Vimu8g01031	369	Pfam	EamA-like transporter family	188	325	IPR000620	GO:0016020
Vimu8g01031	369	Pfam	EamA-like transporter family	26	153	IPR000620	GO:0016020
Vimu8g01031	369	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	49	154	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu8g01031	Vimu-Chr8	17481176	17484706	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu8g01031	1	356	Nodulin-like Gene Family	AT3G28050	49.864	5.29e-119	347

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu8g01031	-		-	gmx:100791805	639.417

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu8g01031	8	17481176	17484706	Vimu8g01031	8	17481176	17484706	ECH

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