Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01031 ATGGATAGAAGATACTGTTACAAGGATTTGCTTCCTCTGATTGTTCTTGTTGCAAATGAATGCAATAACACAGCTTTGTTCACTCTCTTCAAAGCAGCCACTCTGCAAGGGATGAGTAGCTATGTCTTTGTCTCCTATGCCTATTCCTTGGCCTTTCTTGTTCTTCTTCCTATTACTTTTCTCTACAGAAGATCAAGAGTGGTTCCTCCTCTCAGCTTTTCAATCCTATCGAAAATTGCTCTTCTGGGACTCATAGGGTGTTCATCTCAGATTCTGGGGTATGTTGGGATCAGTTATAGTTCTCCCACACTTTCCTCTGCAATCAGCAACCTCACTCCTGCCTTCACCTTCATACTTGCTGTCATTTGCAGGATGGAAAAGATAGTCATAAGAAGTAGAACTACCCAAGCTAAGATTTGGGGCAGCATTATATCGATATCTGGTGCATTTATTGTGACTTTCTGCAAAGGTCAATCGATCATCATTGCTGATAATTCCCCTTCAATTCAACTTTCACAACCAAATGGGTTTCTTGCTTCAGTAGATACAAATTGGACCTTTGGTGGTCTTCTGCTGACAGCTTGCAATATACTGCTTACTATATGGTTTGTTTTACAGGTTGAAATCTTGAAGGAGTTCCCGGATGAACTAACTATGGTGTTCTTTTACAACTTGTATGCAGCCATTGTAGCTTCAATTGTAGGTTTAATTGGGGAGAAAAATTCAAGTGCCTGGAAAATAAGACCAGACATATCCCTGATCTCTATTGTTTGCACTGGAATATTTAACAAGTTCATGAGTAGTGCAATATATGCCTGGGGAATACACCTAAAGGGGCCTGTATATGTAGCAATGTTCAAGCCTCTCTCAATTGTTATTGCAGTTGCCATGGGTGTTATGTTCCTTGGTGATACTCTATATGTTGGAAGTTTGATTGGAGGCACAGTAATATCAATTGGGTTTTATACTGTGATGTGGGGCAAATCAACTGAACAGAAGGAAGAGGAGGAAGATGTTGGTAGCCAAGAATCACCAATCACTGAGAATGTTCCTCTCTTGCAAAGCTATGCAACTCTAAATTCTACAAAGAAAATAGATGCAAGAGTATAA 1110 0.3991 MDRRYCYKDLLPLIVLVANECNNTALFTLFKAATLQGMSSYVFVSYAYSLAFLVLLPITFLYRRSRVVPPLSFSILSKIALLGLIGCSSQILGYVGISYSSPTLSSAISNLTPAFTFILAVICRMEKIVIRSRTTQAKIWGSIISISGAFIVTFCKGQSIIIADNSPSIQLSQPNGFLASVDTNWTFGGLLLTACNILLTIWFVLQVEILKEFPDELTMVFFYNLYAAIVASIVGLIGEKNSSAWKIRPDISLISIVCTGIFNKFMSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGVMFLGDTLYVGSLIGGTVISIGFYTVMWGKSTEQKEEEEDVGSQESPITENVPLLQSYATLNSTKKIDARV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01031 369 PANTHER WAT1-RELATED PROTEIN 11 336 IPR030184 GO:0016020|GO:0022857
Vimu8g01031 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 329 - -
Vimu8g01031 369 Pfam EamA-like transporter family 188 325 IPR000620 GO:0016020
Vimu8g01031 369 Pfam EamA-like transporter family 26 153 IPR000620 GO:0016020
Vimu8g01031 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01031 Vimu-Chr8 17481176 17484706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01031 1 356 Nodulin-like Gene Family AT3G28050 49.864 5.29e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01031 - - gmx:100791805 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01031 8 17481176 17484706 Vimu8g01031 8 17481176 17484706 ECH