Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01024 ATGTCGGAAGGGTTCGCGATCGAACTGTACTTGGATCCGGCGTTGGAGAATCAGGTGCTCAAGGCATGGAACGTTCTTGCGCGCCGACAAATCACCACTCACCTCATCGAGATGGAATCGCGCCCTCACATAACGCTCTTCTCCACCCCCTTCCTAGAACCTTCCAAGCTCGAATCGCTTCTCAGAACCTTCGCATCCAAGCATGATCCTCTCTCTCTCTCCTTCTCCTCCGTCGGCACCTTCCCTAACCACGCCGACAACCTGCTCTTCCTGGCTCCCACGCCCTCCCTCTCCCTCCTCCAATTCCAGTCCCAACTCTGCGACGCCATCAGAAAAGAAGGTATTGAGATCTCCGACGACTTCGCCTTCAATTCCTGGATACCTTACTGCTCGGTCGCACACCACGTCCCCAAAAACAGAATGCCCGAGGCTTTCTCCCTCTTGCGGGAACTCAAGCTGCCGGTTTCCGGTTACGCTACGGACATCGCGCTCGTCCAGTTCTCTCCGGTTCGCGAACTCTTCTCCTTTGTGCTCGGTAATAATGTAGACTCCTGA 555 0.5532 MSEGFAIELYLDPALENQVLKAWNVLARRQITTHLIEMESRPHITLFSTPFLEPSKLESLLRTFASKHDPLSLSFSSVGTFPNHADNLLFLAPTPSLSLLQFQSQLCDAIRKEGIEISDDFAFNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYATDIALVQFSPVRELFSFVLGNNVDS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01024 184 Gene3D Cyclic phosphodiesterase 5 180 - -
Vimu8g01024 184 PANTHER - 1 182 - -
Vimu8g01024 184 SUPERFAMILY LigT-like 5 165 IPR009097 -
Vimu8g01024 184 Pfam 2'-5' RNA ligase superfamily 41 166 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01024 1 184 Calmodulin-binding Proteins AT5G40190 63.587 5.78e-81 236