Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01012 ATGTCTTCGTTTTCTCTTACGTTTCTCACATTATTATCGTTCTTTTGTTTATGCGTTAACGCGCGTCTAACGTTGGACTTCTACAAGGACACGTGTCCGCAGTTCGCGCAGATCATCCGCGACACGGTGACGGCGAAGCAGATCGCGAGTCCCACCACGGCGCCCGCCACAATCCGCCTCTTCCTCCACGACTGCCTCCTCCCAAATGGCTGCGACGCCTCCATCCTCCTCTCCTCCACGGCGTTCAACAAGGCGGAGCGCGACGCCGACATCAACCTCTCCCTCCCAGGCGACGCCTTCGACCTCGTCGTCCGCGCCAAGACCGCCCTCGAACTGGCCTGCCCCAACACCGTCTCCTGCGCCGACATCCTCTCCGCCTCCACCCGCGACCTCCTGACCATGCTCGGCGGCCCCTTCTACCCCGTTTTCCTTGGGCGTCGTGACGGCCGTTTCTCCTCCGCCGCCTCCGTCCCCAACCACCTCCCCACTCCATCCATGCCCATGTCCCAAATCACGGAAATCTTCACCCGGCGCGGGTTCTCCGTGGAGGAGTTCGTCGCTCTGAGTGGGGCCCACACCGTGGGATTCTCCCACTGCTCTGAATTCGTCAGCAACCTCTCGAACTCGTCTTCTTCCTACAACCCTCGTTTTTCTGAAGCTTTATCCAAAGCTTGCGCCGATTACAGAACCAACCCTACCCTTTCCGTCTTCAATGACATTATGACTCCCAACAAGTTCGATAATGTGTACTTCCAGAACCTTCCTAAGGGTTTGGGCGTGCTGAAATCCGATCACGGCTTGTACAGTGACCCTGTTACGAGACCATTCGTGGAGGGCTTCGCCAAGGATCAAGCTAGGTTCTTTAGGGTTTTTGCATCGGCGATGCAGAAGCTGAGTCTGCTCAATGTGCAGACGGGGAGAAAGGGGGAGATCCGACGCAGGTGTGATCAGATTAATTGA 960 0.5719 MSSFSLTFLTLLSFFCLCVNARLTLDFYKDTCPQFAQIIRDTVTAKQIASPTTAPATIRLFLHDCLLPNGCDASILLSSTAFNKAERDADINLSLPGDAFDLVVRAKTALELACPNTVSCADILSASTRDLLTMLGGPFYPVFLGRRDGRFSSAASVPNHLPTPSMPMSQITEIFTRRGFSVEEFVALSGAHTVGFSHCSEFVSNLSNSSSSYNPRFSEALSKACADYRTNPTLSVFNDIMTPNKFDNVYFQNLPKGLGVLKSDHGLYSDPVTRPFVEGFAKDQARFFRVFASAMQKLSLLNVQTGRKGEIRRRCDQIN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01012 319 PANTHER - 6 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 SUPERFAMILY Heme-dependent peroxidases 23 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 ProSiteProfiles Plant heme peroxidase family profile. 22 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 Gene3D Peroxidase, domain 2 162 298 - -
Vimu8g01012 319 Pfam Peroxidase 42 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01012 319 Gene3D - 26 315 - -
Vimu8g01012 319 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601|GO:0042744
Vimu8g01012 319 FunFam Peroxidase 162 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01012 Vimu-Chr8 17273052 17276354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01012 21 319 Peroxidase AT3G28200 67.224 6.88e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01012 K00430 - gmx:100817030 538.495