Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01002 ATGGATTTGTTCCTTGTGAGTAACCTAAACTCCACTGCACTTGCTTTCTTTTCTCTAACATTACTGTTAGCTTTCTCTCTGTTTCTCATTCGTCCCTCCAAAGCCGGTAGTAATCTGCAAGAACCTCCAATGGCCTCAGGTGCATGGCCCATACTCGGCCATCTCATGCTTCTCGGGGGCTCACCAACACCTCACAAGACGTTGGCAGCCATGGCTGACAAATATGGACCCCTCTTCACCATCAAGCTCGGTTCTAGACGCGCTTTGGTTCTCAGCAACTGGAAAATGGCGAAGGAATGTTACACCACAAACGACGTCGTCGTCTCCTCTCGCTCCAAGCTCGTGGCCATCCAACACGTTGCGTACAACCAAGCAAGTTTTGGGTTCGCACCCTATGGTCCTTACTGGCGTGAGATACGGAAGATGGTGACCGCGTTCCTCTCCGACCGCAAAACGGAGCTTCTGAGCCGCGTTAGGGTTTCTGAGATTCGAAGTTCTGTTAAAGAGCTCTTTCATGTTTGGTCGGAGAAGAAAGGGAGTGATGAGTGTGTGGTGGTGGAGATGAAGCAGTGGTTCACAGAGTTGGTGTTCAATATAGTTTTCCAAACCATGGCTGGAAAGCGATTATTTGGTAAAACAGCAGTGGTTAGTGAGAAAGATGCAGAGAAGTGTGTGAAGGCTTTGAGGGAGTTCATGCAGATGTTGGGAGTGTGCACGGTGGCTGATGCTGTTCCTGTTCTGAGGTGGATGAATTTGGGAGTGAAAGCCATGAAAGAAACTGCCAAAGAATTGGATGTGATCTTAGATGAGTGGTTGGTGGAGCACTGCAAAAAGAGGGCTTTATTTGGTGAAAAGGGTGTTGAAAGAGACGACCAAGACTTCATGGATACGATGCTTTCAGTTCTTGAAGGTGCCACCATCGATGGCTTCGATGCTGCTACTATAAACAAGGCCACAACATTGGCGTTGATCTTGGGTGCCACTGATACAAGCACAGTCACTCTTACATGGGTGATATGTTTCTTGTTGAAAAATCCTCTTATATTAGAAAAGGTAAAAGAAGAGATGAATATTCAGATTGGGAAAGAGAGATTCATAAGTGAGTCAGATGTGAACAAGTTAGTGTATCTTCAAGCAGTAGTGAAAGAGACATTGAGGTTGTATCCACCAGGACCTCTCTCAGCACCTCGTGAATTCACACAAGATTGCATGTTAGGTAGCTATCACATCAAAAAGGGAACTCGATTAATCACAAACCTGTGGAAGATCCAAACTGATCCAAATATTTGGTTGGATCCATTGACGTTCAAACCAGAAAGATTTATTACTACTCACAAAGATGTTGATGTTAAGGGTCAAAATTTTGAGTTGTTACCGTTTGGAAGTGGCAGAAGAATATGTCCAGGAATATCCTTTGGCCTTAACATGATTCATTTAACTCTAGCTAATTTTTTGCACTCTTATGAAATATTTAATAAACCTAATGAAGTTATTGATATGAGAGAAACTCTTGGAATGACCAACGAAAAAGCTACACCACTTGAGATTCTTGTTAAACCTCGTTTGTCTTCAGAAATTTCTTCTGAGAAACGGCCTCCAATAGTGAAAGGTGCATGGCCAATACTTGGTCATCTTTCACTGTTAAATGCTTCAAAAACACCCCATAGAACTTTGGGTGCTTTGGCTGACAAGTATGGACCCTTGTTCACCATCAAACTCGGTGTGAAAGAGGCTTTGGTGCTCAACAACTGGGAAATGTCCAAGGAACTCTTCACCACAAATGACCTTGCCGTTTCATCACGCCCTAAACTCGTTGCTATAGAAGTCATGTCCTACAACCAAGCCTTCGTAGGGTTGGCTCCGTACGGACCCTATTGGCGAGAGCTTCGGAAGATTGTGACTAAAGAGTTTCTCTCCAACCCCAGAATAGAGCAACTCAGCCACATTCGTATCTCAGAGGTTCAAACCTCATTCAAAGAGCTCTACGATTTATGCTATACTAGTGTAAACAACAAGAAGGAGAATGAATCTAGTTATGGTGCTGCTACTTTGGTGGACATGAAAGAATGGCTTGAACATTTGACTTTCAATATAATAGTGAGGATGGTGGTGGGGAAGAGATACTGTGTGGCGCATGTGGAGGGCAAGGAGAAGGCAGAAAGGTTTATGAAGAATTTAGATGAGTTCATGAATTTGATGGGCACTTTCACTGTGGCTGATGGGGTTCCTTGCTTGAGGTGGTTGGATTTGGGAGGCCATGAGAAGGCCATGAAAGCAACGGCTGAGGAAATGGACAAGCTGTTGAGTGAGTGGTTGGAAGAGCACCGTGAGAAGAATGGTTTGGGTGGGAAGGTTAAGGGCGATCAAGACTTCATGGATGTGATGATTTCAACACTTAATGGGGCTCCGATTCATGGGTTTGATGCTGATACCATTTGCAAAGCCACTACCCTGGAATTGATTTTGGGTGCAAGTGATTCAACTGCTGTTACTCTTACATGGGCACTTAGTCTGCTAGTACGAAATCCTCTTGCAATGGAAAAGGCTAAAGAAGAAATTGACATGCATATTGGGAAAGAGGGATACATAAGAGAAGCAGACATAAGCAAACTTGTGTATCTTGAAGCCATAATCAAAGAGACATTGAGATTGTATCCACCAGCACCTCTTTCATCACCTCGTGTATTCACAGAAAATTGCATCTTAGGTGGCTACCACATAAAAAAGGGAACTCGACTAATGCATAACCTATGGAAGATCCAGAGAGACCCTAGTGTTTGGTCAGATCCATTAGAATTCAAACCAGAAAGGTTCATCACCACTCACCAACATGTGAATCTGAAAGGTCGACATTTTGAGTTGTTACCCTTTGGAAGTGGGAGAAGAATGTGTGTTGGAATGTCCCTTGGCTTAAACGTGCTTCATTTTACTTTGGCTAATATGTTGCATTCCTTTGACATCTCAAATCCTTCGACTGAACCTGTTGATATGACCGAGTTCTTTCGATTTGTCAATACCAGAGCTACTCCACTGAAGCTTTTGAATTCCCTCATCTCCCCTTCCCTCGTCTCCCCAATTTCAGACTATCTAGTTCAATCCACTGCTAGTTTCTCACCTTCCTTCGTCTCCACTCGCTCTGATTTGACTCGCCTCATTCGCTTCCCCTGCCGCGTCACCTTCTACCGCGGCCTCGTCATCTCCTCCATGTTCCCTGGCGCCGGAGGGTTTATCTCGCCGGACAACGGCGGCGAAGTCTCCTACGAGCTGCACCACGACTTCTCACCACAGCGCCGCTGCAGCGGCTCGCCGGTGTTCGTCACGCTGCTGGTGAATTCCGTCAGCCAGGAGAGCAGCCGAGTCTTGAGGCCCAAGGCGATAATGTTCTCGCTCAAGGCACTCGCCACGGCCGGCATCGAAGGTGTCGTGGTCGAGATTTGGTGGGGCTTGGTTGAGAAGAACAAACCTAGGGTTTACGACTGGAACTTGTTGCGATGGCATGCAAGTGTGGCCTCAAGGTTCGAGCGGTTCTCGCGTTTCATCAGCATGGCGTGGGACCTGATGATCCCAATTGGTATGTGGAAATTGGATCCCCGCGTTAGCCATAAAATGACCAAAACGGTGTATACTACCTGA 3633 0.4569 MDLFLVSNLNSTALAFFSLTLLLAFSLFLIRPSKAGSNLQEPPMASGAWPILGHLMLLGGSPTPHKTLAAMADKYGPLFTIKLGSRRALVLSNWKMAKECYTTNDVVVSSRSKLVAIQHVAYNQASFGFAPYGPYWREIRKMVTAFLSDRKTELLSRVRVSEIRSSVKELFHVWSEKKGSDECVVVEMKQWFTELVFNIVFQTMAGKRLFGKTAVVSEKDAEKCVKALREFMQMLGVCTVADAVPVLRWMNLGVKAMKETAKELDVILDEWLVEHCKKRALFGEKGVERDDQDFMDTMLSVLEGATIDGFDAATINKATTLALILGATDTSTVTLTWVICFLLKNPLILEKVKEEMNIQIGKERFISESDVNKLVYLQAVVKETLRLYPPGPLSAPREFTQDCMLGSYHIKKGTRLITNLWKIQTDPNIWLDPLTFKPERFITTHKDVDVKGQNFELLPFGSGRRICPGISFGLNMIHLTLANFLHSYEIFNKPNEVIDMRETLGMTNEKATPLEILVKPRLSSEISSEKRPPIVKGAWPILGHLSLLNASKTPHRTLGALADKYGPLFTIKLGVKEALVLNNWEMSKELFTTNDLAVSSRPKLVAIEVMSYNQAFVGLAPYGPYWRELRKIVTKEFLSNPRIEQLSHIRISEVQTSFKELYDLCYTSVNNKKENESSYGAATLVDMKEWLEHLTFNIIVRMVVGKRYCVAHVEGKEKAERFMKNLDEFMNLMGTFTVADGVPCLRWLDLGGHEKAMKATAEEMDKLLSEWLEEHREKNGLGGKVKGDQDFMDVMISTLNGAPIHGFDADTICKATTLELILGASDSTAVTLTWALSLLVRNPLAMEKAKEEIDMHIGKEGYIREADISKLVYLEAIIKETLRLYPPAPLSSPRVFTENCILGGYHIKKGTRLMHNLWKIQRDPSVWSDPLEFKPERFITTHQHVNLKGRHFELLPFGSGRRMCVGMSLGLNVLHFTLANMLHSFDISNPSTEPVDMTEFFRFVNTRATPLKLLNSLISPSLVSPISDYLVQSTASFSPSFVSTRSDLTRLIRFPCRVTFYRGLVISSMFPGAGGFISPDNGGEVSYELHHDFSPQRRCSGSPVFVTLLVNSVSQESSRVLRPKAIMFSLKALATAGIEGVVVEIWWGLVEKNKPRVYDWNLLRWHASVASRFERFSRFISMAWDLMIPIGMWKLDPRVSHKMTKTVYTT 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01002 1210 Pfam Cytochrome P450 44 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 Pfam Cytochrome P450 536 1004 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 CDD CYP82 76 521 - -
Vimu8g01002 1210 CDD CYP82 566 1020 - -
Vimu8g01002 1210 SUPERFAMILY Cytochrome P450 533 1013 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 PANTHER CYTOCHROME P450 82C3-RELATED 529 1014 - -
Vimu8g01002 1210 FunFam Cytochrome P450 82C4 32 519 - -
Vimu8g01002 1210 FunFam Cytochrome P450 82C4 523 1016 - -
Vimu8g01002 1210 SUPERFAMILY Cytochrome P450 48 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 PRINTS E-class P450 group I signature 562 581 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 PRINTS E-class P450 group I signature 586 607 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 PRINTS E-class P450 group I signature 916 940 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 PRINTS E-class P450 group I signature 954 964 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 PRINTS E-class P450 group I signature 964 987 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 PRINTS E-class P450 group I signature 694 712 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 PRINTS E-class P450 group I signature 832 858 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 PRINTS E-class P450 group I signature 875 893 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 SUPERFAMILY (Trans)glycosidases 1118 1164 IPR017853 -
Vimu8g01002 1210 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Vimu8g01002 1210 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 957 966 IPR017972 GO:0005506|GO:0016705
Vimu8g01002 1210 PRINTS P450 superfamily signature 955 964 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 PRINTS P450 superfamily signature 823 840 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 PRINTS P450 superfamily signature 876 887 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 PRINTS P450 superfamily signature 964 975 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 Gene3D Glycosidases 1096 1174 - -
Vimu8g01002 1210 Gene3D Cytochrome P450 520 1014 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01002 1210 Gene3D Cytochrome P450 30 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01002 Vimu-Chr8 17148956 17158654 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01002 43 526 Cytochrome P450 AT4G31940 47.368 7.41e-158 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01002 - - pvu:PHAVU_004G021100g 863.218