Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00996 ATGAATGTTCTATTTAAGGAGCCTCCTACTCAACAGCACACAGCCCTAACAAAATCTGAAATGGATTTTCTTCTAAATTACCTGAATTCCACTACCGCTGGATTTCTGTCTCTAATCCTCTTCTGTTTATTTCTGTACAATCCCTTCAAATTTCGTCAGGGTAAAGAGGCTCCCAGAGTTGCAGGAGCATGGCCAATAATTGGTCACCTTCCATTGTTGAGTCGTTCAAAGACACCCCATAGAACTTTGGCTGCTTTGGCTGAAAAATATGGACCCATCTTCACCATCCAACTTGGTTCCAAAAAGACTTTAGTAATCAACAACTGGGAAATATCAAAGGAATGCTTCACCACAAACGACACGGCGGTTTCCTCTCGCCCCAAGCTTGTTGGCATGGAACTCATGGGCTACAACAACGCCGTGTTTGCCTTTGCACCCTATGGTCCCTATTGGCGCGAGCTACGAAAGATTACAACTTTAGAGATCCTTTCCTCTCGTCGAGTGCAACAACAGCAGCACGTTCGAGTCTCAGAACTTCAAAGCTCGATCAAAGAGTTGTATAACCTTTGGTGTAGCCAAAAGAATGAGTCTGGCTATGCCTTAGTGGAGCTGAAGCAATGGTTTTCTCACCTGGCTTTCAACATGGTCCTTCGCATGGTCGTTGGGAAGAGATACTTTGGCAGTGAAAACGTGGACGATGAGAAGGCACAGCAATGTGTGAAAGCTGTGGAGGAATTCATGCGTCTCTTGGGTGTGTTCGCAGTGGGAGATGCTATTCCTTGGTTGAGATGGCTTGATTTTGGAGGCCATGAGAAGGCAATGAAAGAAACTGCCAAAGAATTGGACAATATTTTAAGCATGGAGTTAGAGGAACATAGACAAAAGAAGGGTTTGGGTGAGAAGGTTCATGAATTTCAAGATTTCATGGATGTCATGATTTCCTTGTTTGATGGAAAAACTATTGATGGGATTGATGCAGATACCTTGATCAAATCCACTGTGCTGACAGTGATTTTAGGAGGAACTGACACAACTAATATTGTTCTTACATGGGCAATATCTTTGATATTGAGAAATCCTTCTGTACTGGAAAAAGTTAAAACTGAACTAAACATTCAAATTGGGAAAGAAAAATTGGTGACTGAGTCAGATATAAGTAAGTTAACATATCTTCAAGCCATCGTGAAAGAAACTTTGAGATTGTATCCTCCTGGACCTCTTTCGGGACCTCGTGAATTCACAGAGAATTGCACTTTAAGTGGTTATAACATAGAAAAGGGAACTCGTCTAATTACAAATCTTTGGAAGATTCAGACAGATAGCAATGTTTGGGAAGATCCGTTGGAATTCAAACCAGAAAGGTTTGTAACAACTCACAAAGATATTGATATCAAAGGTCAACATTTTGAGTTATTACCATTTGGAAGTGGTAGAAGAATGTGTCCAGGAGTATCCTTTGGCCTTCAAATGGTGCATTTTATTCTTGCTACTTTTTTGCATTCTTTTGAAATTCTAAGTTCATCACCTGATCCTATTGATATGACTGAAACCTTTGGATTAGTCAATACCAAAACCACTCCACTTGAGATTCTTATTAAACCATATTTATCTTTTACTTGTTATGAAAACCTATAA 1635 0.4018 MNVLFKEPPTQQHTALTKSEMDFLLNYLNSTTAGFLSLILFCLFLYNPFKFRQGKEAPRVAGAWPIIGHLPLLSRSKTPHRTLAALAEKYGPIFTIQLGSKKTLVINNWEISKECFTTNDTAVSSRPKLVGMELMGYNNAVFAFAPYGPYWRELRKITTLEILSSRRVQQQQHVRVSELQSSIKELYNLWCSQKNESGYALVELKQWFSHLAFNMVLRMVVGKRYFGSENVDDEKAQQCVKAVEEFMRLLGVFAVGDAIPWLRWLDFGGHEKAMKETAKELDNILSMELEEHRQKKGLGEKVHEFQDFMDVMISLFDGKTIDGIDADTLIKSTVLTVILGGTDTTNIVLTWAISLILRNPSVLEKVKTELNIQIGKEKLVTESDISKLTYLQAIVKETLRLYPPGPLSGPREFTENCTLSGYNIEKGTRLITNLWKIQTDSNVWEDPLEFKPERFVTTHKDIDIKGQHFELLPFGSGRRMCPGVSFGLQMVHFILATFLHSFEILSSSPDPIDMTETFGLVNTKTTPLEILIKPYLSFTCYENL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00996 544 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 CDD CYP82 91 534 - -
Vimu8g00996 544 PANTHER CYTOCHROME P450 82C3-RELATED 39 541 - -
Vimu8g00996 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Vimu8g00996 544 Gene3D Cytochrome P450 49 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 Pfam Cytochrome P450 58 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 SUPERFAMILY Cytochrome P450 63 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00996 544 FunFam Cytochrome P450 82C4 49 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00996 Vimu-Chr8 17094927 17098032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00996 57 541 Cytochrome P450 AT4G31970 50.610 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00996 - - gmx:100805047 821.617