Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00935 ATGGAGATATCGAAAGCGATGGACGCTCTCCGAGAGAGAGCGACGTTCGTAAAGGAGTCACTTCACAAGAGCCAGACCATCACCGATAACATGGTCTCCATTCTCGGTTCCTTCGATCATCGTCTCTCCGCACTCGAAACCGCCATGCGTCCCACTCAGATAAAAACGCATTCAATTCGTAGTGCACATGATAACATTGACAAGACTCTAAAAGCAGCAGAGGTGATTTTGGCGCAATTCGACCAGACACGAATGGCGGAGGCTAAAATACTTCGAGGGCCGCACGAGGATCTAGAAAGCTATTTAGGAGCAATTGATCAGTTGAGGGCAAATGTTCGTTTTTTTAGTAGTAAAAAGAGCTTCAAAAGTAGCGACGTTATCGTCACCCATGCTAATACCTTGCTTGCCAAAGCTATCGCAAAGTTAGAAGAGGAATTCAAACATCTTTTGACAAATTATAGTAAACCTGTGGAACCAGATCGGCTTTTTGAGTGCCTACCAAACTCCCTAAGGCCCTCAAATTCTGGGAAGCAAGGTGAGGGTGGTGGAAGAAACCACTCCGGAAAACAAAGTTCAGAGGCTGTCACTTTCGCACTTCCAACTCTCATTCCACCAAGAGTCATACCTTTGCTTCATGATTTAACACAACAAATGGTTCAAGCTGGTCATCAACAACAACTTTTTCGAATATACAGTACGGTTTCTGATCTATGTTCCAAAATTTGTAGAGAAACCCGAGCGGCAGTCCTGGAACAAAGTCTTAAGAAGTTAGGTGTCGAAAGGTTGAGTAAGGATGACGTTCAGAGAATGCAATGGGAGGTTTTGGAGGCAAAGATTGGCAATTGGATTCATTACATGAGGATTGCTGTCAAATTGTTGATTTCTGGAGAGAAGAAAATTTGTGATCAAATATTTGATGGTGTGGACTCTTTGAAATCTCAATGTTTTGCTGAAGTCACTGCTAGTAGTGTGGCTATGCTTCTTAGTTTTGGAGAGGCTGTTGCAAAAAGTAAGAGGTCACCTGAGAAATTATTTGTTCTTCTAGACATGTATGAGATAATGAGAGAGCTTCAACCAGAGATTGAGAGACTTTTTGAAAGTAAAGCATGCACTGAAATGAGAGAAGCTGCAATAAATTTGTCAACGAGATTAGCTCAAACTGCCCAAGAAACCTTTGTTGATTTTGAGGAAGCAGTTGAAAAAGATGCCACTAAAACTACTGTAATGGATGGAACTTTTGATCCCAATGACCCGGACGGACAATTAGCAATTATTACAACAAGGATTATGCAGGCTCTCCAAACTAACTTGGATGGAAAATCAAAACAATATAAAGATCCAGCACTGACCCAGTTGTTTCTTATGAATAACATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGACATGTTAGGAGATGATTGGGTGCAAATACATAGAAGAATTGTGCAACAACATGCAAATCAGTATAAAAGGATTTCTTGGGCAAAGATTTTACAATGCCTCACTGTCCCAGCAAGTGAAAACAATAATGCAGTAACAAGAACAATGATTAAAGATAGATTCAAGACATTTAACGATCAAATTGAAGAGCTTCATCAACGGCAATCTCAATGGACTGTTCCCGACAGTGAATTGCGTGAATCTCTCAGATTGGCTGTTGCTGAAGTCTTGTTGCCCGCATATAGATCTTTCCTAAAACGTTTTGGGCCCGTGATAGAGAACGGCAAAAATCCTTATAAGTACATGGTATATTCTCCCGAACATCTTGAGCAAATGCTGGGTGAATTTTTTGAAAGCAAGATATGGGGTGAACCAAAGCGATAA 1836 0.4107 MEISKAMDALRERATFVKESLHKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEVILAQFDQTRMAEAKILRGPHEDLESYLGAIDQLRANVRFFSSKKSFKSSDVIVTHANTLLAKAIAKLEEEFKHLLTNYSKPVEPDRLFECLPNSLRPSNSGKQGEGGGRNHSGKQSSEAVTFALPTLIPPRVIPLLHDLTQQMVQAGHQQQLFRIYSTVSDLCSKICRETRAAVLEQSLKKLGVERLSKDDVQRMQWEVLEAKIGNWIHYMRIAVKLLISGEKKICDQIFDGVDSLKSQCFAEVTASSVAMLLSFGEAVAKSKRSPEKLFVLLDMYEIMRELQPEIERLFESKACTEMREAAINLSTRLAQTAQETFVDFEEAVEKDATKTTVMDGTFDPNDPDGQLAIITTRIMQALQTNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVPASENNNAVTRTMIKDRFKTFNDQIEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPVIENGKNPYKYMVYSPEHLEQMLGEFFESKIWGEPKR 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00935 611 Pfam Exo70 exocyst complex subunit 416 598 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vimu8g00935 611 Pfam Exo70 exocyst complex subunit 281 414 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vimu8g00935 611 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 415 IPR004140 GO:0000145|GO:0006887
Vimu8g00935 611 Gene3D Exocyst complex component Exo70 74 414 - -
Vimu8g00935 611 MobiDBLite consensus disorder prediction 165 190 - -
Vimu8g00935 611 SUPERFAMILY Cullin repeat-like 76 602 IPR016159 -
Vimu8g00935 611 Gene3D Exocyst complex component Exo70 415 611 - -
Vimu8g00935 611 MobiDBLite consensus disorder prediction 168 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00935 Vimu-Chr8 16539784 16546480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00935 1 611 EXO70 exocyst subunit family AT5G52340 72.516 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00935 K07195 - gmx:100779774 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g00935 8 16539784 16546480 Vimu8g00935 8 16539784 16546480 ECH