Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00899 ATGTCTAGCAGAAGGTCAAGGCAACAATCTGCATCAACAAGGATCTCAGATGACCAAATCATCGACCTTGTTTCAAAGTTGCGTCAACTTGTTCCTGAGATTCGTGATAGACGCTCTGATAAGCGAACCCTTGCCAACAAACCCTTGCCAGTTTTCCCCAATTGGGTTGCTTCAAAGCTCCTTGGCAAACTTTCATTCACGGACGCCGTCTCCAACCTTCGCACAACCATTCGCAGACGCCATCCTCGGTCGCACCTCATTCTGTGGTTGCAGGGGCTCACCATCGTCATAGGGTTTGTTCAAGACAAAGGGCTGTTGGAGGGTATTAACAGAGCCTCCATCTCCTTCCCTCATGCGCAGAGGCAGAGGCATTCACTCGTAAAGGATCCTTCGAGAGTTGGTAAGTTTCTCGTTCTAGGACTTCGCAAATGGGCATTGTCGTGA 444 0.4955 MSSRRSRQQSASTRISDDQIIDLVSKLRQLVPEIRDRRSDKRTLANKPLPVFPNWVASKLLGKLSFTDAVSNLRTTIRRRHPRSHLILWLQGLTIVIGFVQDKGLLEGINRASISFPHAQRQRHSLVKDPSRVGKFLVLGLRKWALS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00899 147 PANTHER TRANSCRIPTION FACTOR PRE 1 45 IPR044293 GO:0006355|GO:0040008|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00899 Vimu-Chr8 16125196 16128964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00899 14 87 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 36.486 6.25e-08 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00899 - - gmx:100305611 77.0257