Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00835 ATGGAAGAACATGATGGTGGTGATGGTGAGTGTAATGATGATGGGGTGGTTGTCATTGGTGGTGATGGGAAATCCGGTTGGAACAATAATCATGATGTGAACTACACTGAATGGTCTGCCCAAGAACATGTCTATGTTGGAGATTGGCTTTTGTTCACGTTTGACAAAAGATACTTCAATGTTCTGGAGGTGAACAAGACAAGCTACGAGAATTGCATAGACAGAGAGTTCATAAGAAACGTGACAAGAGGTGGTCGTGATGTTGTGCAGATGACAGAGGCAAAGACCTATTACTACCTCTCAGGTGGAGGCTACTGTTTCCATGGCATGAAAGTTGCTGTGCATGTTCAACAACATCCTGCAATCGCACCAGCTCCATCCATGCCTGTCTCTGCTTCTCCTTTGCTCTCGCTCTCATCGTCTTCCTGCATTTCGATCATTCTCGTTAATGTCCTTTATTATGTCAACTTCCTTTTCATGGATGGTTCGTGTCAGCTGAGCTTTTCTTAG 510 0.4431 MEEHDGGDGECNDDGVVVIGGDGKSGWNNNHDVNYTEWSAQEHVYVGDWLLFTFDKRYFNVLEVNKTSYENCIDREFIRNVTRGGRDVVQMTEAKTYYYLSGGGYCFHGMKVAVHVQQHPAIAPAPSMPVSASPLLSLSSSSCISIILVNVLYYVNFLFMDGSCQLSFS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00835 169 ProSiteProfiles Phytocyanin domain profile. 16 118 IPR003245 GO:0009055
Vimu8g00835 169 SUPERFAMILY Cupredoxins 18 117 IPR008972 -
Vimu8g00835 169 PANTHER BLUE COPPER PROTEIN 21 123 IPR039391 GO:0009055
Vimu8g00835 169 Pfam Plastocyanin-like domain 27 110 IPR003245 GO:0009055
Vimu8g00835 169 Gene3D - 16 121 IPR008972 -
Vimu8g00835 169 FunFam Lamin-like protein 15 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00835 Vimu-Chr8 15293218 15295087 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00835 21 148 Phytocyanin Superfamily AT2G27035 40.625 1.17e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00835 - - gmx:100788336 192.586