Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00833 ATGGAGGATAGGATGAAGAAGAGGGTGTTTTCTCCACCCATTGTGCTTCTCTTTCTAGCTTTATCACTTCTTCTCTTGCTTCCAGAAGCTTCTGCTACAAAATTTAACGTTGGAGATAACAAGTTTTGGAACCCCAATATCAACTACACTGAATGGGCCAAAGGAAAACATTTCTACCTTGGAGATTGGCTGTATTTTGTCTACGACAGGAACCAAGCTAGCGTGCTGGAAGTGAACAAGACCGATTATGAGACTTGTAACTCTGATCATCCAATCACAAACTGGACAAGGGGTGCAGGAAGAGATGTGGTTCCTCTAAACGTAACCAAAACCTACTACATCATCAGTGGCAAAGGGTTCTGCTTCAGTGGCATGAAGGTGGCTGTTCATGTTGAAAAGCTACCACCTCCGCCGAAAGCCGCCCCTGTAAAATCCGGTGCACCAACACTCTTCTCCACCGGCCACATTCTTCTCACGCCGGTCGTTTTCGCCGTCGGAGCAGCGTGGGATGCATTCATTCATTTCTGGTAG 531 0.467 MEDRMKKRVFSPPIVLLFLALSLLLLLPEASATKFNVGDNKFWNPNINYTEWAKGKHFYLGDWLYFVYDRNQASVLEVNKTDYETCNSDHPITNWTRGAGRDVVPLNVTKTYYIISGKGFCFSGMKVAVHVEKLPPPPKAAPVKSGAPTLFSTGHILLTPVVFAVGAAWDAFIHFW 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00833 176 FunFam Lamin-like protein 31 134 - -
Vimu8g00833 176 Pfam Plastocyanin-like domain 43 125 IPR003245 GO:0009055
Vimu8g00833 176 PANTHER BLUE COPPER PROTEIN 32 138 IPR039391 GO:0009055
Vimu8g00833 176 SUPERFAMILY Cupredoxins 32 131 IPR008972 -
Vimu8g00833 176 Gene3D - 31 134 IPR008972 -
Vimu8g00833 176 ProSiteProfiles Phytocyanin domain profile. 33 133 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00833 Vimu-Chr8 15283641 15285657 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00833 10 176 Phytocyanin Superfamily AT5G15350 58.580 5.02e-70 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00833 - - gmx:100305564 298.13