Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00811 AATCCAGCAGCTACCATATTCAAGAGTTACGAAGGACAAGATTCATCAGCCCCTTACATTGCTCCTTTCTCATCAAGAGGTCTAAATAAGGTCACTCCAAATATTCTTAAGCCTGATATAGCAGCTCCAGGAGTTGAAATTCTGGCTGCATGGTCTCCGATTTCTCCTATTTCTGCAGTTAAAGGAGAAAGAAGAGTATCAAATTTGAATATAATATCTGGAACTTCAATGGCATGCCCTCATGTTACTGCAGCAGCTGCTTACGTCAAATCATTTCATCCCAAATGTAATATAATTACCAAATTTGTTCGTTCATTATTTTCAGCTACCCCTATGAATCCTGCACTTGATGTAGAGGCTGAATTTGCTTACGGTGCGGGGCAAATCAATCCTTTGAAGGCAGTAAATCCTGGACTAGTTTATGATGCTGGTGAATATGATTATATTAGTTTTCTGTGTGGAGAAGGTTATAGTTCATTAGCGCTGGGAATAATTACAGGAGATAACAGCACTTGCACATCAGCAAATAAAAAAGGGTCTGTTTTCAACCTTAATCTCCCATCTTTTGTTCTATCAACCGATGGCTCAAGCCACAACAATGTCACTTTTGGTAGAACTGTCACAAATGTTGGATCAGCTACATCCAAATATAGGGCCACAATAACTGCACATCCATCTTCGTTAAATGTCCAAGTACTGCCAAATGTTTTGGCCTTCTCATCGTTGGGTCAGAGGTTGTCTTTTACCCTTAAGATTGAAGGAAACATTGATGCAGACTCGGTTTCTTTTGATTTGACTTGGGACGACGGAACCTTTAAGGCAAGGAGCCCCGGTATTGTTTATGTTGGATAA 852 0.4002 NPAATIFKSYEGQDSSAPYIAPFSSRGLNKVTPNILKPDIAAPGVEILAAWSPISPISAVKGERRVSNLNIISGTSMACPHVTAAAAYVKSFHPKCNIITKFVRSLFSATPMNPALDVEAEFAYGAGQINPLKAVNPGLVYDAGEYDYISFLCGEGYSSLALGIITGDNSTCTSANKKGSVFNLNLPSFVLSTDGSSHNNVTFGRTVTNVGSATSKYRATITAHPSSLNVQVLPNVLAFSSLGQRLSFTLKIEGNIDADSVSFDLTWDDGTFKARSPGIVYVG 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00811 283 ProSitePatterns Serine proteases, subtilase family, serine active site. 74 84 IPR023828 -
Vimu8g00811 283 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 277 IPR045051 -
Vimu8g00811 283 Gene3D - 1 13 - -
Vimu8g00811 283 SUPERFAMILY Subtilisin-like 17 136 IPR036852 GO:0004252|GO:0006508
Vimu8g00811 283 Pfam Subtilase family 17 127 IPR000209 GO:0006508|GO:0008236
Vimu8g00811 283 ProSiteProfiles Serine proteases, subtilase domain profile. 1 135 - -
Vimu8g00811 283 Gene3D Peptidase S8/S53 domain 14 148 IPR036852 GO:0004252|GO:0006508
Vimu8g00811 283 Pfam Fibronectin type-III domain 183 279 IPR041469 -
Vimu8g00811 283 Gene3D - 152 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00811 Vimu-Chr8 15036487 15037602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00811 1 281 Subtilisin-like Serine Gene Family AT5G59100 45.804 3.41e-73 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00811 - - var:108336584 444.121