Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu8g00770 | ATGTTTTCTTCTTCTTCTCATTGCAGTTCAGTGATCAAATGGAGTTCCCTAGTCAAGTTTCTCTTCTTCGTGGTTCTGTTGTTGTCGCCAAGCGACGCAGTATTGGCCGATTCGGACGAATCCGCTCTCCTTCGTCTGAAGGCATCGTTTTCCGACCCCGCCGGCGTTCTCTCCACATGGACCTCCGCAGCCGGCGCTGACTCTGGCTACTGCTCCTGGTCTGGTGTCCTCTGCAACGCAAACTCCCGGGTGGTCGCCGTCAACGTCACCGGAAACGGCGGCAACCGCCGCAACGGAACCTCTCACCCGTGCAAAGGTTTCTCTCAATTCCCTCTTTACGGATTCGGAGTTCGGCGAACGTGCGAAGGTAGTAAAGGTTCTCTCTTTGGAAACGTTTCTTCTTTTAATTTCATCAGTGTGCTCACGGAGCTTAGGGTTTTGTCTCTCCCCTTCAACGCGTTGGAGGGGGAAATTCCCGAAGCAATTTGGGGCTTGGAAAAGCTAGAGGTTCTCGATTTAGAGGGGAATCTGATAAGTGGATATCTTCCGTTTAGAATTAACGGCTTAAGGAAGTTGAGGGTTCTGAATCTTGGGTTTAATAGGATTGTAGGGGAGATTCCTAGTTCAATTTCGTCTCTTGAGAGTTTGGAGGTTTTGAATTTGGCTGGTAATGAATTGAATGGTTCTGTTCCTAGTTTTGTTGGGAGGCTTAGAGGGGTGTATCTTTCGTTTAATCAGTTCAGTGGGGTTGTTCCGCAAGAGATTGGGGAGAATTGTTGGAAGCTTGAGCATTTGGATTTGTCTGGGAATTCGTTGGTTCAAGGGATTCCGGTGAGTTTAGGGAATTGTGAGAGGTTGAGGACGCTTTTGCTGTATTCCAATTTGTTGGAAGAGGGTATTCCTACTGAGCTTGGGAAGCTCAAGAGCCTTGAGGTGTTGGATGTGTCCAGGAACACTCTTAGTGGTTCTGTGCCTGAAGAGCTTGGGAATTGCTTGGAGTTGTCAGTCCTTGTGCTGTCAAATCTCTTTGATCCACGCGGGGATGTCGCTGGTGATTTTGGGAAATTGGGTTCGGTGAATGATGAGCTGAACTATTTTGAAGGGTCGATACCTGTGGAGGTTTTATCGCTTCCAAAGCTGACGATATTGTGGGCTCCCATGGTGAATTTGGAAGGCAGTTTTCAGGTAAGTTGGGGTCGTTGTCAGAGCTTAGAGATGGTTAATTTGGCTCAGAATTTTTTTAGTGGGGAATTTCCGAACCAGCTTGGTGTCTGCGAGAGACTTTATTTTCTTGATTTAAGTGGAAACAGCCTTACCGGGGTTCTTTCTAGAGAACTTCGCGTTCCCTGTATGAGCATGTTTGATGTTAGTGGGAACATGTTATCTGGTTCAATTCCTGATTTCTCTGATATTGTATGTCCCCCTGAACCTTCTTGGAATGGCAACCTATTTGAAGATGGTAATGTTTCTCCACCATATGCATCATTTTTTTTGTCAAAGGTTTGGGAGAATTCACTTTTCACAGCAATGGGGGGAGTTGGTATTTCGGTTGCTCACAACTTTGGTCGAAACAACTTCAATGGCATTCTGTCATTACCTGTGGCACGGGACAGGCTGGGGAAACAGAGCAGTTACACATTTCTGGTTGGTGAAAATAATCTTACTGAACCATTTCCTACGTATTTATTTGAGAAATGCCATGGGTTAGATGCATTGCTTCTAAATGTCAGTTATAATAGGATAACTGGTCATATTCCTTCCAATCTCAGTGGGATGTGCAGATCATTGAAATTTTTGGATGCATCTGGAAATCAGCTTGCAGGACCAATTCCCGTTGATTTAGGGAATATGGTCTCCCTGGCATCGCTGAACCTCAGTAAGAATCAGTTAGAAGGCGAGATTCCCACCAACCTTGGCCAGATAAAGAATCTGAAGTTTCTTTCTTTGGCTGGTAATAAGTTAAATGGCTCAATTCCGACCAGCCTGGGGCAGTTGTACTCTTTGGAAATCTTGGACCTTTCTTCAAACTATCTTACTGGTGAGATTCCAAAGGCTATTGAGAACATGAGAAATCTGACTGATGTTTTGCTCAATAACAACAATCTTTCTGGTCACATTCCTGGTGGTTTGGCATATGTCACCACACTCTCAGCATTCAATGTGTCTTTCAACAACTTATCTGGATCATTGCCTTCTAATAGTGGCTTGATTAAATGTAGTAGTGCTGTTGGGAATCCGTTTCTAAGTCCCTGCCGTGGAGTTTCTCTATCTGTGCCGTCAGGAAATCAACTAGGGCCTATTTATGGCAGCCCTTATAATCCAGCAACTGAACAAGCCACTGTCAAGGGCAGTGGTAATGGCTTGAGTTCTATTGAAATAGCATCTATAACTTCTGCTTCAGCCATTTTTTCCGTTCTTATAGCCCTGATTGTTCTATTTTTTTACACTCGGAAGTGGAAGCCTGGGTCCAGGGTTGTTGGTTCTACTAGAAAAGAAGTTACAGTGTTTACTGATATCGGGGTCCCGTTGACTTTTGAAAGTGTTGTCCAAGCCACAGGAAATTTCAATGCTGGCAACTGCATTGGGAGTGGAGGTTTTGGGGCAACATACAAGGCAGAGGTAGCACCAGGAGTCTTGGTGGCCGTCAAACGACTTGCAGTTGGACGTTTCCAAGGTGTTCAACAATTCCATGCGGAAACCAAGACCCTTGGGAGGCTTCATCATCCTAATCTTGTCACTCTAATTGGTTATCATGCTTGTGAGACAGAGATGTTTCTCATATACAATTATTTGCCTGGTGGGAATCTTGAAAAGTTCATCCAAGAGAGGTCCACAAGGGTTGTGGATTGGAGGATTCTTCACAAGATTGCATTGGACATAGCCCGTGCACTGGCCTATCTGCATGATCAGTGTGTTCCCCGTGTTCTTCACCGTGATGTGAAGCCCAGCAATATCTTGTTAGATGACGATTTCAATGCTTATCTATCGGACTTTGGATTGGCTAGACTTCTGGGAACATCAGAGACACATGCTACCACTGGTGTAGCGGGAACATTTGGGTATGTTGCCCCTGAATATGCCATGACTTGCCGTGTTTCTGATAAGGCTGATGTGTATAGCTATGGTGTGGTGCTTCTGGAGTTGCTCTCAGACAAGAAGGCTTTGGACCCTTCATTTTCTTCTTTTGGAAATGGGTTCAATATAGTGGCATGGGCATGCATGCTACTGAAGCAAGGAAGGGCAAATGAGTTTTTCACTGCTGGGTTATGGGAAGCAGGACCTGGAGAGGATTTGGTAGAGGTTCTTCACTTGGCTATTGTCTGTACTGTTGACTCTCTCTCTACCAGACCTACAATGAAACAAGTTGTGAGAAGGCTCAAGCAGCTTCAACCCCCATCATGCTAG | 3405 | 0.4529 | MFSSSSHCSSVIKWSSLVKFLFFVVLLLSPSDAVLADSDESALLRLKASFSDPAGVLSTWTSAAGADSGYCSWSGVLCNANSRVVAVNVTGNGGNRRNGTSHPCKGFSQFPLYGFGVRRTCEGSKGSLFGNVSSFNFISVLTELRVLSLPFNALEGEIPEAIWGLEKLEVLDLEGNLISGYLPFRINGLRKLRVLNLGFNRIVGEIPSSISSLESLEVLNLAGNELNGSVPSFVGRLRGVYLSFNQFSGVVPQEIGENCWKLEHLDLSGNSLVQGIPVSLGNCERLRTLLLYSNLLEEGIPTELGKLKSLEVLDVSRNTLSGSVPEELGNCLELSVLVLSNLFDPRGDVAGDFGKLGSVNDELNYFEGSIPVEVLSLPKLTILWAPMVNLEGSFQVSWGRCQSLEMVNLAQNFFSGEFPNQLGVCERLYFLDLSGNSLTGVLSRELRVPCMSMFDVSGNMLSGSIPDFSDIVCPPEPSWNGNLFEDGNVSPPYASFFLSKVWENSLFTAMGGVGISVAHNFGRNNFNGILSLPVARDRLGKQSSYTFLVGENNLTEPFPTYLFEKCHGLDALLLNVSYNRITGHIPSNLSGMCRSLKFLDASGNQLAGPIPVDLGNMVSLASLNLSKNQLEGEIPTNLGQIKNLKFLSLAGNKLNGSIPTSLGQLYSLEILDLSSNYLTGEIPKAIENMRNLTDVLLNNNNLSGHIPGGLAYVTTLSAFNVSFNNLSGSLPSNSGLIKCSSAVGNPFLSPCRGVSLSVPSGNQLGPIYGSPYNPATEQATVKGSGNGLSSIEIASITSASAIFSVLIALIVLFFYTRKWKPGSRVVGSTRKEVTVFTDIGVPLTFESVVQATGNFNAGNCIGSGGFGATYKAEVAPGVLVAVKRLAVGRFQGVQQFHAETKTLGRLHHPNLVTLIGYHACETEMFLIYNYLPGGNLEKFIQERSTRVVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSFGNGFNIVAWACMLLKQGRANEFFTAGLWEAGPGEDLVEVLHLAIVCTVDSLSTRPTMKQVVRRLKQLQPPSC | 1134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu8g00770 | 1134 | Gene3D | Ribonuclease Inhibitor | 517 | 764 | IPR032675 | - | |
Vimu8g00770 | 1134 | Gene3D | Ribonuclease Inhibitor | 241 | 343 | IPR032675 | - | |
Vimu8g00770 | 1134 | Gene3D | Ribonuclease Inhibitor | 348 | 489 | IPR032675 | - | |
Vimu8g00770 | 1134 | CDD | STKc_IRAK | 861 | 1129 | - | - | |
Vimu8g00770 | 1134 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 237 | 1128 | - | - | |
Vimu8g00770 | 1134 | SMART | LRR_sd22_2 | 307 | 330 | - | - | |
Vimu8g00770 | 1134 | SMART | LRR_sd22_2 | 141 | 167 | - | - | |
Vimu8g00770 | 1134 | SMART | LRR_sd22_2 | 665 | 691 | - | - | |
Vimu8g00770 | 1134 | SMART | LRR_sd22_2 | 259 | 278 | - | - | |
Vimu8g00770 | 1134 | SMART | LRR_sd22_2 | 189 | 215 | - | - | |
Vimu8g00770 | 1134 | SUPERFAMILY | L domain-like | 38 | 342 | - | - | |
Vimu8g00770 | 1134 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 975 | 987 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu8g00770 | 1134 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 819 | 930 | - | - | |
Vimu8g00770 | 1134 | SUPERFAMILY | L domain-like | 301 | 468 | - | - | |
Vimu8g00770 | 1134 | ProSiteProfiles | Protein kinase domain profile. | 855 | 1129 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu8g00770 | 1134 | SUPERFAMILY | L domain-like | 551 | 734 | - | - | |
Vimu8g00770 | 1134 | ProSitePatterns | Protein kinases ATP-binding region signature. | 861 | 883 | IPR017441 | GO:0005524 | |
Vimu8g00770 | 1134 | Gene3D | Transferase(Phosphotransferase) domain 1 | 931 | 1131 | - | - | |
Vimu8g00770 | 1134 | Pfam | Leucine Rich Repeat | 261 | 283 | IPR001611 | GO:0005515 | |
Vimu8g00770 | 1134 | Pfam | Leucine Rich Repeat | 191 | 213 | IPR001611 | GO:0005515 | |
Vimu8g00770 | 1134 | Pfam | Leucine Rich Repeat | 667 | 689 | IPR001611 | GO:0005515 | |
Vimu8g00770 | 1134 | Pfam | Leucine rich repeat N-terminal domain | 36 | 79 | IPR013210 | - | |
Vimu8g00770 | 1134 | Pfam | Protein kinase domain | 858 | 1056 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu8g00770 | 1134 | SMART | LRR_typ_2 | 307 | 331 | IPR003591 | - | |
Vimu8g00770 | 1134 | SMART | LRR_typ_2 | 261 | 283 | IPR003591 | - | |
Vimu8g00770 | 1134 | SMART | LRR_typ_2 | 665 | 689 | IPR003591 | - | |
Vimu8g00770 | 1134 | SMART | LRR_typ_2 | 617 | 641 | IPR003591 | - | |
Vimu8g00770 | 1134 | SMART | LRR_typ_2 | 189 | 212 | IPR003591 | - | |
Vimu8g00770 | 1134 | SMART | LRR_typ_2 | 213 | 237 | IPR003591 | - | |
Vimu8g00770 | 1134 | SMART | LRR_typ_2 | 141 | 165 | IPR003591 | - | |
Vimu8g00770 | 1134 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 931 | 1133 | - | - | |
Vimu8g00770 | 1134 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 357 | 532 | - | - | |
Vimu8g00770 | 1134 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 660 | 742 | - | - | |
Vimu8g00770 | 1134 | Gene3D | Ribonuclease Inhibitor | 35 | 240 | IPR032675 | - | |
Vimu8g00770 | 1134 | PRINTS | Leucine-rich repeat signature | 665 | 678 | - | - | |
Vimu8g00770 | 1134 | PRINTS | Leucine-rich repeat signature | 428 | 441 | - | - | |
Vimu8g00770 | 1134 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 252 | 343 | - | - | |
Vimu8g00770 | 1134 | SMART | serkin_6 | 855 | 1133 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu8g00770 | 1134 | Gene3D | Phosphorylase Kinase; domain 1 | 820 | 930 | - | - | |
Vimu8g00770 | 1134 | SUPERFAMILY | Protein kinase-like (PK-like) | 837 | 1126 | IPR011009 | - | |
Vimu8g00770 | 1134 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 559 | 659 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu8g00770 | Vimu-Chr8 | 14640933 | 14644337 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu8g00770 | 33 | 1134 | Receptor kinase-like Gene Family | AT3G02130 | 62.844 | 0.0 | 1310 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XV | Vimu8g00770 | Pkinase | 6.3e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu8g00770 | - | - | vum:124828178 | 1876.29 |