Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00768 ATGAAGTTCTTAGCCATGGAGGAAGCAAGAAGTGTGAAAGTTGTGGAAGTTTGCAGTGTGGCACCATCAGAGGCGGCAGCAGCAACAACCAATTGCTCCACTCCGACATCTTTGTCTCTGACATTCTTTGACCTACTATGGTTAAGGAGTCCCCCAGTCGAACGTGTTTTCTTCTATCAACTTCCCAACACAACCATCTCCTTCTTTGACACCATTCTTCCCAATCTCAAGCTCTCTCTTTCTCTCACACTCCAACACTTTCTCCCTCTTGCTGGCACCATCACATGGCCCCTTGAATCTCCACACCCCATCATCAACTATGTCCCTGGCAATGCCGTTTCCTTCATCATAGCTGAATCCACCACTGATTTTAACATGCTTTGTTCCAATACCTGTCAGGCTTCTCTGCTCCATCCTCTGATACCCCACTTGCCCACTTCCGATGAACAAGCATCTGTGATGGCCCTCCAGGTTACCCTTTTTCCTGGTTCTGGTTTTTCCATCGGAATAACCACACACCATGCAGCCACGGATGGAAAAGCCACAACTTTGTTTCTCAAAGCATGGGCCTATGTTTGCTCCAATAACTTCACAGAGTCGTCGTTTTCGTCGTTGCCAAAACACCTCACGCCCTTCTATGACAGGTCAATGATAAAGGACACCAAAGGAATCGGTGCGATGTATTTGCAGAGTTGGTTGAACATCGGTGGACCAAACAATAGGAGCATGAAGGTGTGGGATCTTGGAGGTGTAAATGCAATGTCAGCCGAATCAGTCAGAGGGTCGTTCGAGTTAACCTCTTCAAACATCCGACAGCTGAAGCAACATGCAAAATCTAAGCTCGATGAGAATGCTCATGTGTCAACATATTCGGTTGCTTGTGCTTATGTGTTGCAGTGTTTGGTGAAGGCAGAACAACCTAAGACTGATGGAGACTCGTATGGAGACACCCATTTCCTCCACGTATTTTGGAAACTGCATCTGAAGGTTATGGAGGAAACAAAGAAGTTGTTGGGAGATGATGGTTTCATCAATGGTGTTGAAGGGATGAATGAAGCTTTGAAGAAGTTGGAGGATGGAGTGTTTAGTGAGGCAGTGACTTTGTCTACAATGATGAAAATTGCGAGAGATAATCGAATACTTACAACTGCAGGGTCACCACGATTTGAGGTATATAGTATTGATTTTGGATGGGGAAAGCCAATGAAGGTGGATATGACATCCATAGGCAAAAGTGGAGCATTCTGCATTTCTGAAAGTAGGAATGAGAATGGAGGAGTTGAGATTAGTTTGGTGTTGAACAAGCAACAAATGGAAACTTTCGTTGCTCATTTTAATCAAGGTCTTCAATCCCTTTAA 1359 0.4481 MKFLAMEEARSVKVVEVCSVAPSEAAAATTNCSTPTSLSLTFFDLLWLRSPPVERVFFYQLPNTTISFFDTILPNLKLSLSLTLQHFLPLAGTITWPLESPHPIINYVPGNAVSFIIAESTTDFNMLCSNTCQASLLHPLIPHLPTSDEQASVMALQVTLFPGSGFSIGITTHHAATDGKATTLFLKAWAYVCSNNFTESSFSSLPKHLTPFYDRSMIKDTKGIGAMYLQSWLNIGGPNNRSMKVWDLGGVNAMSAESVRGSFELTSSNIRQLKQHAKSKLDENAHVSTYSVACAYVLQCLVKAEQPKTDGDSYGDTHFLHVFWKLHLKVMEETKKLLGDDGFINGVEGMNEALKKLEDGVFSEAVTLSTMMKIARDNRILTTAGSPRFEVYSIDFGWGKPMKVDMTSIGKSGAFCISESRNENGGVEISLVLNKQQMETFVAHFNQGLQSL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00768 452 Gene3D - 11 243 IPR023213 -
Vimu8g00768 452 Gene3D - 255 452 IPR023213 -
Vimu8g00768 452 PANTHER - 11 451 - -
Vimu8g00768 452 Pfam Transferase family 365 446 - -
Vimu8g00768 452 Pfam Transferase family 35 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00768 Vimu-Chr8 14599415 14600802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00768 56 441 Monolignol Biosynthesis Gene Families AT5G48930 22.477 2.01e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00768 - - vra:106767538 822.387